Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 MIR2861-201ENST00000636310 90 ntBASIC19.43■□□□□ 0.7
NDE1Q9NXR1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 AC020763.4-201ENST00000623414 4170 ntBASIC19.43■□□□□ 0.7
NDE1Q9NXR1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NDE1Q9NXR1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDE1Q9NXR1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 EEF1DP3-203ENST00000566025 782 ntBASIC19.41■□□□□ 0.7
NDE1Q9NXR1 AL512631.2-201ENST00000604634 923 ntBASIC19.41■□□□□ 0.7
NDE1Q9NXR1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDE1Q9NXR1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDE1Q9NXR1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms