Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 PLK5-205ENST00000642079 1969 ntBASIC18.64■□□□□ 0.57
HPF1Q9NWY4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 AC006058.3-201ENST00000606217 1069 ntBASIC18.63■□□□□ 0.57
HPF1Q9NWY4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HPF1Q9NWY4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPF1Q9NWY4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 UNC93B4-201ENST00000505679 747 ntBASIC18.61■□□□□ 0.57
HPF1Q9NWY4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 SOX15-203ENST00000570788 1093 ntBASIC18.61■□□□□ 0.57
HPF1Q9NWY4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 AC138932.1-201ENST00000534164 6830 ntBASIC18.61■□□□□ 0.57
HPF1Q9NWY4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HPF1Q9NWY4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPF1Q9NWY4 AL390719.1-204ENST00000412397 1219 ntBASIC18.6■□□□□ 0.57
HPF1Q9NWY4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms