Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AL162393.1-201ENST00000437852 946 ntBASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMCO4Q9NRQ5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.83■□□□□ 0.13
SMCO4Q9NRQ5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SMCO4Q9NRQ5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMCO4Q9NRQ5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SMCO4Q9NRQ5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMCO4Q9NRQ5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SMCO4Q9NRQ5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SMCO4Q9NRQ5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.83■□□□□ 0.12
SMCO4Q9NRQ5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 AC068880.1-201ENST00000507289 2297 ntBASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.82■□□□□ 0.12
SMCO4Q9NRQ5 AC099398.1-201ENST00000567919 2776 ntBASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 OR7E47P-201ENST00000546390 1422 ntBASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SMCO4Q9NRQ5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms