Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF556Q9HAH1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZNF556Q9HAH1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF556Q9HAH1 AL020996.1-203ENST00000536896 2307 ntBASIC18.6■□□□□ 0.57
ZNF556Q9HAH1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF556Q9HAH1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF556Q9HAH1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF556Q9HAH1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 AC125437.2-201ENST00000625180 2167 ntBASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF556Q9HAH1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF556Q9HAH1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 TMEM179-206ENST00000616017 1645 ntBASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF556Q9HAH1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF556Q9HAH1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 KRT87P-202ENST00000534226 1464 ntBASIC18.55■□□□□ 0.56
ZNF556Q9HAH1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms