Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DUX4L2-201ENST00000561772 1275 ntBASIC17.22■□□□□ 0.35
NICN1Q9BSH3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DUX4L6-201ENST00000626483 1275 ntBASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DUX4L1-201ENST00000627662 1275 ntBASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DUX4L8-201ENST00000629013 1275 ntBASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DUX4L3-201ENST00000630187 1275 ntBASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DUX4L7-201ENST00000630678 1275 ntBASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DUX4L5-201ENST00000630834 1275 ntBASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NICN1Q9BSH3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NICN1Q9BSH3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
NICN1Q9BSH3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.21■□□□□ 0.34
NICN1Q9BSH3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 AL020996.1-203ENST00000536896 2307 ntBASIC17.2■□□□□ 0.34
NICN1Q9BSH3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 AP001160.3-201ENST00000601484 763 ntBASIC17.2■□□□□ 0.34
NICN1Q9BSH3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms