Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MUC4Q99102 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.67□□□□□ -0.06
MUC4Q99102 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MUC4Q99102 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.67□□□□□ -0.06
MUC4Q99102 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.67□□□□□ -0.06
MUC4Q99102 AL356652.1-201ENST00000615962 565 ntBASIC14.67□□□□□ -0.06
MUC4Q99102 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.67□□□□□ -0.06
MUC4Q99102 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.67□□□□□ -0.06
MUC4Q99102 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.67□□□□□ -0.06
MUC4Q99102 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MUC4Q99102 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
MUC4Q99102 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.66□□□□□ -0.06
MUC4Q99102 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.66□□□□□ -0.06
MUC4Q99102 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MUC4Q99102 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.66□□□□□ -0.06
MUC4Q99102 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.66□□□□□ -0.06
MUC4Q99102 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
MUC4Q99102 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.66□□□□□ -0.06
MUC4Q99102 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.66□□□□□ -0.06
MUC4Q99102 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MUC4Q99102 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.66□□□□□ -0.06
MUC4Q99102 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MUC4Q99102 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MUC4Q99102 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MUC4Q99102 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
MUC4Q99102 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MUC4Q99102 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.66□□□□□ -0.06
MUC4Q99102 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.66□□□□□ -0.06
MUC4Q99102 DUX4L16-201ENST00000555130 1264 ntBASIC14.66□□□□□ -0.06
MUC4Q99102 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.66□□□□□ -0.06
MUC4Q99102 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.65□□□□□ -0.06
MUC4Q99102 RNF165-205ENST00000588679 2904 ntBASIC14.65□□□□□ -0.06
MUC4Q99102 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MUC4Q99102 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.65□□□□□ -0.06
MUC4Q99102 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
MUC4Q99102 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.65□□□□□ -0.06
MUC4Q99102 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.65□□□□□ -0.06
MUC4Q99102 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.65□□□□□ -0.06
MUC4Q99102 AC087633.2-202ENST00000565166 1439 ntBASIC14.65□□□□□ -0.06
MUC4Q99102 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
MUC4Q99102 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
MUC4Q99102 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.65□□□□□ -0.06
MUC4Q99102 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MUC4Q99102 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MUC4Q99102 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.65□□□□□ -0.06
MUC4Q99102 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
MUC4Q99102 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.65□□□□□ -0.06
MUC4Q99102 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.65□□□□□ -0.07
MUC4Q99102 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.07
MUC4Q99102 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.64□□□□□ -0.07
MUC4Q99102 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.64□□□□□ -0.07
MUC4Q99102 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.64□□□□□ -0.07
MUC4Q99102 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.64□□□□□ -0.07
MUC4Q99102 SLC7A5P1-201ENST00000568957 537 ntBASIC14.64□□□□□ -0.07
MUC4Q99102 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.64□□□□□ -0.07
MUC4Q99102 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.64□□□□□ -0.07
MUC4Q99102 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MUC4Q99102 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MUC4Q99102 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.64□□□□□ -0.07
MUC4Q99102 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.64□□□□□ -0.07
MUC4Q99102 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MUC4Q99102 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.64□□□□□ -0.07
MUC4Q99102 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.64□□□□□ -0.07
MUC4Q99102 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
MUC4Q99102 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.64□□□□□ -0.07
MUC4Q99102 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MUC4Q99102 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 AC116562.4-201ENST00000641316 2276 ntBASIC14.64□□□□□ -0.07
MUC4Q99102 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MUC4Q99102 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MUC4Q99102 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms