Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YME1L1Q96TA2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
YME1L1Q96TA2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
YME1L1Q96TA2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YME1L1Q96TA2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 KRT8P36-201ENST00000489121 1440 ntBASIC21.68■■□□□ 1.06
YME1L1Q96TA2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YME1L1Q96TA2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 LINC01568-207ENST00000641790 1380 ntBASIC21.67■■□□□ 1.06
YME1L1Q96TA2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YME1L1Q96TA2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 AC027702.1-201ENST00000563810 1770 ntBASIC21.66■■□□□ 1.06
YME1L1Q96TA2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
YME1L1Q96TA2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 GUSBP5-202ENST00000510805 1989 ntBASIC21.65■■□□□ 1.06
YME1L1Q96TA2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 AC113347.1-201ENST00000413321 391 ntBASIC21.65■■□□□ 1.06
YME1L1Q96TA2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 NAPSB-206ENST00000562112 1266 ntBASIC21.65■■□□□ 1.06
YME1L1Q96TA2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
YME1L1Q96TA2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
YME1L1Q96TA2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 KRT18P57-201ENST00000443599 1254 ntBASIC21.64■■□□□ 1.05
YME1L1Q96TA2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 CR392000.1-201ENST00000624770 1228 ntBASIC21.64■■□□□ 1.05
YME1L1Q96TA2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
YME1L1Q96TA2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YME1L1Q96TA2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
YME1L1Q96TA2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YME1L1Q96TA2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
YME1L1Q96TA2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
YME1L1Q96TA2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
YME1L1Q96TA2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
YME1L1Q96TA2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
YME1L1Q96TA2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms