Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCGB3A1Q96QR1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCGB3A1Q96QR1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.38□□□□□ -0.11
SCGB3A1Q96QR1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCGB3A1Q96QR1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCGB3A1Q96QR1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCGB3A1Q96QR1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SCGB3A1Q96QR1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SCGB3A1Q96QR1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
SCGB3A1Q96QR1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 TSPY9P-201ENST00000440215 945 ntBASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 TSPY11P-201ENST00000442607 1045 ntBASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 MIR4787-201ENST00000607364 84 ntBASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCGB3A1Q96QR1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCGB3A1Q96QR1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms