Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 LETM1P2-201ENST00000597330 2178 ntBASIC17.29■□□□□ 0.36
CMTM3Q96MX0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMTM3Q96MX0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMTM3Q96MX0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.28■□□□□ 0.36
CMTM3Q96MX0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMTM3Q96MX0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.27■□□□□ 0.36
CMTM3Q96MX0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CMTM3Q96MX0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMTM3Q96MX0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMTM3Q96MX0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMTM3Q96MX0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CMTM3Q96MX0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CMTM3Q96MX0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CMTM3Q96MX0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CMTM3Q96MX0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.27■□□□□ 0.35
CMTM3Q96MX0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.27■□□□□ 0.35
CMTM3Q96MX0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.27■□□□□ 0.35
CMTM3Q96MX0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.27■□□□□ 0.35
CMTM3Q96MX0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CMTM3Q96MX0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CMTM3Q96MX0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 AC233992.3-201ENST00000607491 485 ntBASIC17.26■□□□□ 0.35
CMTM3Q96MX0 AC105233.4-201ENST00000642045 216 ntBASIC17.26■□□□□ 0.35
CMTM3Q96MX0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMTM3Q96MX0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 NEFHP1-201ENST00000412845 2629 ntBASIC17.25■□□□□ 0.35
CMTM3Q96MX0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 AL032819.2-201ENST00000624543 2162 ntBASIC17.25■□□□□ 0.35
CMTM3Q96MX0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 AC005082.1-201ENST00000413042 2259 ntBASIC17.25■□□□□ 0.35
CMTM3Q96MX0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMTM3Q96MX0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms