Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
DDX11Q96FC9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 AC112907.3-201ENST00000577781 2400 ntBASIC23.85■■□□□ 1.41
DDX11Q96FC9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX11Q96FC9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX11Q96FC9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DDX11Q96FC9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX11Q96FC9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 AL355472.2-201ENST00000422958 438 ntBASIC23.85■■□□□ 1.41
DDX11Q96FC9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX11Q96FC9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX11Q96FC9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX11Q96FC9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX11Q96FC9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.85■■□□□ 1.41
DDX11Q96FC9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX11Q96FC9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
DDX11Q96FC9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX11Q96FC9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.83■■□□□ 1.41
DDX11Q96FC9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX11Q96FC9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX11Q96FC9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX11Q96FC9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX11Q96FC9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.83■■□□□ 1.41
DDX11Q96FC9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
DDX11Q96FC9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX11Q96FC9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX11Q96FC9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
DDX11Q96FC9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX11Q96FC9 AC007322.3-201ENST00000426526 701 ntBASIC23.83■■□□□ 1.41
DDX11Q96FC9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.83■■□□□ 1.41
DDX11Q96FC9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.83■■□□□ 1.41
DDX11Q96FC9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.83■■□□□ 1.41
DDX11Q96FC9 MIR2861-201ENST00000636310 90 ntBASIC23.83■■□□□ 1.41
DDX11Q96FC9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DDX11Q96FC9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX11Q96FC9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX11Q96FC9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX11Q96FC9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX11Q96FC9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX11Q96FC9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 KRT17P1-201ENST00000399211 1546 ntBASIC23.82■■□□□ 1.4
DDX11Q96FC9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX11Q96FC9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX11Q96FC9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX11Q96FC9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.82■■□□□ 1.4
DDX11Q96FC9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
DDX11Q96FC9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
DDX11Q96FC9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms