Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9CQ8N5M4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 AC026185.1-201ENST00000445748 174 ntBASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 AC105020.6-201ENST00000621523 1217 ntBASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9CQ8N5M4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 SMG8-203ENST00000578922 2178 ntBASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9CQ8N5M4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 AL589743.5-201ENST00000616611 1050 ntBASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC9CQ8N5M4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 AL355472.2-201ENST00000422958 438 ntBASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 AC093787.1-201ENST00000450396 207 ntBASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 RAP2CP1-201ENST00000605103 478 ntBASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 AC099778.1-201ENST00000568593 1911 ntBASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC9CQ8N5M4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms