Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX60Q8IY21 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX60Q8IY21 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 AC012306.2-201ENST00000609350 630 ntBASIC25.03■■□□□ 1.6
DDX60Q8IY21 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX60Q8IY21 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX60Q8IY21 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.03■■□□□ 1.6
DDX60Q8IY21 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
DDX60Q8IY21 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX60Q8IY21 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DDX60Q8IY21 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX60Q8IY21 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DDX60Q8IY21 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.02■■□□□ 1.6
DDX60Q8IY21 AL031963.3-201ENST00000606441 850 ntBASIC25.02■■□□□ 1.6
DDX60Q8IY21 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX60Q8IY21 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX60Q8IY21 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX60Q8IY21 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 AF106564.1-201ENST00000607058 2553 ntBASIC25.01■■□□□ 1.59
DDX60Q8IY21 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX60Q8IY21 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX60Q8IY21 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DDX60Q8IY21 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.01■■□□□ 1.59
DDX60Q8IY21 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX60Q8IY21 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX60Q8IY21 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25■■□□□ 1.59
DDX60Q8IY21 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25■■□□□ 1.59
DDX60Q8IY21 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 PNN-205ENST00000556530 601 ntTSL 2 BASIC25■■□□□ 1.59
DDX60Q8IY21 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25■■□□□ 1.59
DDX60Q8IY21 AF186192.3-201ENST00000583427 947 ntBASIC25■■□□□ 1.59
DDX60Q8IY21 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
DDX60Q8IY21 AL353708.3-201ENST00000610272 989 ntBASIC25■■□□□ 1.59
DDX60Q8IY21 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
DDX60Q8IY21 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
DDX60Q8IY21 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25■■□□□ 1.59
DDX60Q8IY21 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25■■□□□ 1.59
DDX60Q8IY21 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25■■□□□ 1.59
DDX60Q8IY21 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25■■□□□ 1.59
DDX60Q8IY21 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25■■□□□ 1.59
DDX60Q8IY21 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX60Q8IY21 AC121338.2-201ENST00000622535 1744 ntBASIC24.99■■□□□ 1.59
DDX60Q8IY21 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX60Q8IY21 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.99■■□□□ 1.59
DDX60Q8IY21 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
DDX60Q8IY21 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
DDX60Q8IY21 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 AC211429.1-201ENST00000415277 523 ntBASIC24.98■■□□□ 1.59
DDX60Q8IY21 AL353807.1-201ENST00000427475 662 ntBASIC24.98■■□□□ 1.59
DDX60Q8IY21 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.98■■□□□ 1.59
DDX60Q8IY21 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.98■■□□□ 1.59
DDX60Q8IY21 AP001412.1-201ENST00000608405 714 ntBASIC24.98■■□□□ 1.59
DDX60Q8IY21 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 CLDN5-201ENST00000403084 2357 ntBASIC24.98■■□□□ 1.59
DDX60Q8IY21 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms