Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCUBE3Q8IX30 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCUBE3Q8IX30 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCUBE3Q8IX30 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
SCUBE3Q8IX30 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SCUBE3Q8IX30 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCUBE3Q8IX30 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.14■□□□□ 0.98
SCUBE3Q8IX30 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SCUBE3Q8IX30 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCUBE3Q8IX30 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCUBE3Q8IX30 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SCUBE3Q8IX30 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE3Q8IX30 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE3Q8IX30 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE3Q8IX30 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE3Q8IX30 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE3Q8IX30 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE3Q8IX30 TSPY20P-201ENST00000450910 630 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms