Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DHX40Q8IX18 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.35■■□□□ 1.17
DHX40Q8IX18 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.35■■□□□ 1.17
DHX40Q8IX18 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.35■■□□□ 1.17
DHX40Q8IX18 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.35■■□□□ 1.17
DHX40Q8IX18 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DHX40Q8IX18 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 AL162430.1-201ENST00000480705 870 ntBASIC22.34■■□□□ 1.17
DHX40Q8IX18 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DHX40Q8IX18 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.34■■□□□ 1.17
DHX40Q8IX18 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DHX40Q8IX18 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DHX40Q8IX18 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DHX40Q8IX18 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.33■■□□□ 1.17
DHX40Q8IX18 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
DHX40Q8IX18 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.33■■□□□ 1.17
DHX40Q8IX18 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.33■■□□□ 1.17
DHX40Q8IX18 CCDC92B-201ENST00000575506 885 ntBASIC22.33■■□□□ 1.17
DHX40Q8IX18 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
DHX40Q8IX18 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.33■■□□□ 1.16
DHX40Q8IX18 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
DHX40Q8IX18 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
DHX40Q8IX18 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.33■■□□□ 1.16
DHX40Q8IX18 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
DHX40Q8IX18 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
DHX40Q8IX18 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 AC027612.3-201ENST00000413684 1047 ntBASIC22.32■■□□□ 1.16
DHX40Q8IX18 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 YBX1P1-201ENST00000445822 960 ntBASIC22.32■■□□□ 1.16
DHX40Q8IX18 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DHX40Q8IX18 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.32■■□□□ 1.16
DHX40Q8IX18 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.31■■□□□ 1.16
DHX40Q8IX18 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DHX40Q8IX18 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms