Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LDB1Q86U70 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
LDB1Q86U70 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LDB1Q86U70 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
LDB1Q86U70 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB1Q86U70 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LDB1Q86U70 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LDB1Q86U70 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LDB1Q86U70 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB1Q86U70 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.1■□□□□ 0.81
LDB1Q86U70 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.1■□□□□ 0.81
LDB1Q86U70 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.1■□□□□ 0.81
LDB1Q86U70 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB1Q86U70 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.1■□□□□ 0.81
LDB1Q86U70 AC092666.2-201ENST00000613287 246 ntBASIC20.1■□□□□ 0.81
LDB1Q86U70 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.1■□□□□ 0.81
LDB1Q86U70 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB1Q86U70 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LDB1Q86U70 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LDB1Q86U70 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB1Q86U70 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LDB1Q86U70 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB1Q86U70 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LDB1Q86U70 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.1■□□□□ 0.81
LDB1Q86U70 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LDB1Q86U70 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.09■□□□□ 0.81
LDB1Q86U70 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDB1Q86U70 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDB1Q86U70 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.09■□□□□ 0.81
LDB1Q86U70 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.09■□□□□ 0.81
LDB1Q86U70 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDB1Q86U70 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDB1Q86U70 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.09■□□□□ 0.81
LDB1Q86U70 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LDB1Q86U70 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.09■□□□□ 0.81
LDB1Q86U70 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LDB1Q86U70 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.09■□□□□ 0.81
LDB1Q86U70 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LDB1Q86U70 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LDB1Q86U70 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LDB1Q86U70 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LDB1Q86U70 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LDB1Q86U70 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.08■□□□□ 0.81
LDB1Q86U70 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LDB1Q86U70 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LDB1Q86U70 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LDB1Q86U70 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LDB1Q86U70 AC105020.6-201ENST00000621523 1217 ntBASIC20.08■□□□□ 0.81
LDB1Q86U70 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LDB1Q86U70 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
LDB1Q86U70 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LDB1Q86U70 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LDB1Q86U70 TCF3P1-201ENST00000423021 1937 ntBASIC20.08■□□□□ 0.8
LDB1Q86U70 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LDB1Q86U70 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.07■□□□□ 0.8
LDB1Q86U70 AC105036.2-201ENST00000569468 176 ntBASIC20.07■□□□□ 0.8
LDB1Q86U70 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.07■□□□□ 0.8
LDB1Q86U70 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LDB1Q86U70 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.07■□□□□ 0.8
LDB1Q86U70 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LDB1Q86U70 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.07■□□□□ 0.8
LDB1Q86U70 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.06■□□□□ 0.8
LDB1Q86U70 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDB1Q86U70 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LDB1Q86U70 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDB1Q86U70 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.06■□□□□ 0.8
LDB1Q86U70 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.06■□□□□ 0.8
LDB1Q86U70 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LDB1Q86U70 AC133552.2-202ENST00000575694 574 ntBASIC20.06■□□□□ 0.8
LDB1Q86U70 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
LDB1Q86U70 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.06■□□□□ 0.8
LDB1Q86U70 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDB1Q86U70 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDB1Q86U70 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.06■□□□□ 0.8
LDB1Q86U70 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDB1Q86U70 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LDB1Q86U70 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 AL512625.2-201ENST00000417533 625 ntBASIC20.05■□□□□ 0.8
LDB1Q86U70 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.05■□□□□ 0.8
LDB1Q86U70 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.05■□□□□ 0.8
LDB1Q86U70 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDB1Q86U70 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms