Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP1BQ7LBR1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHMP1BQ7LBR1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 AC073210.2-201ENST00000430369 194 ntBASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP1BQ7LBR1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 AC097658.1-201ENST00000475555 843 ntBASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 AC092118.2-201ENST00000613495 667 ntBASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 AL589743.5-201ENST00000616611 1050 ntBASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP1BQ7LBR1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP1BQ7LBR1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP1BQ7LBR1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP1BQ7LBR1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 AL157384.1-201ENST00000445995 2473 ntBASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 PGM5P4-201ENST00000421970 445 ntBASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP1BQ7LBR1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 CYP2T3P-201ENST00000601990 817 ntBASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms