Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 PRORSD1P-201ENST00000295112 541 ntBASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 AC073648.6-201ENST00000641589 218 ntBASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEF20Q5VT98 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 DPP3P2-201ENST00000416030 1696 ntBASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 AC092720.2-201ENST00000602388 1665 ntBASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 AC008687.6-201ENST00000596318 630 ntBASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PRAMEF20Q5VT98 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEF20Q5VT98 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.39■□□□□ 0.54
PRAMEF20Q5VT98 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.39■□□□□ 0.54
PRAMEF20Q5VT98 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.39■□□□□ 0.54
PRAMEF20Q5VT98 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEF20Q5VT98 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEF20Q5VT98 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.39■□□□□ 0.54
PRAMEF20Q5VT98 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 KRT17P3-201ENST00000420566 1262 ntBASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 AC233263.1-201ENST00000578059 224 ntBASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF20Q5VT98 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms