Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PRAMEP78395 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEP78395 AC004911.1-201ENST00000416316 871 ntBASIC20.26■□□□□ 0.83
PRAMEP78395 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEP78395 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.26■□□□□ 0.83
PRAMEP78395 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEP78395 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.26■□□□□ 0.83
PRAMEP78395 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEP78395 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEP78395 PCDHAC2-203ENST00000615316 3011 ntBASIC20.26■□□□□ 0.83
PRAMEP78395 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEP78395 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PRAMEP78395 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEP78395 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEP78395 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PRAMEP78395 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEP78395 AC080038.1-201ENST00000611274 1154 ntBASIC20.25■□□□□ 0.83
PRAMEP78395 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEP78395 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEP78395 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PRAMEP78395 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEP78395 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEP78395 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEP78395 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEP78395 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEP78395 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PRAMEP78395 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PRAMEP78395 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEP78395 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEP78395 AC099778.1-201ENST00000568593 1911 ntBASIC20.24■□□□□ 0.83
PRAMEP78395 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEP78395 AC005181.1-201ENST00000604782 1256 ntBASIC20.24■□□□□ 0.83
PRAMEP78395 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEP78395 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEP78395 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEP78395 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEP78395 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEP78395 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEP78395 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PRAMEP78395 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PRAMEP78395 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEP78395 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEP78395 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PRAMEP78395 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 OR10C1-204ENST00000622521 1039 ntBASIC20.23■□□□□ 0.83
PRAMEP78395 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEP78395 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEP78395 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PRAMEP78395 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEP78395 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 AC112907.3-201ENST00000577781 2400 ntBASIC20.22■□□□□ 0.83
PRAMEP78395 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PRAMEP78395 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.22■□□□□ 0.83
PRAMEP78395 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 AC073111.5-205ENST00000641717 521 ntBASIC20.22■□□□□ 0.83
PRAMEP78395 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PRAMEP78395 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEP78395 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
PRAMEP78395 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEP78395 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PRAMEP78395 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.21■□□□□ 0.83
PRAMEP78395 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEP78395 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms