Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H3AP68431 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 AL050303.2-201ENST00000619798 666 ntBASIC17.6■□□□□ 0.41
HIST1H3AP68431 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
HIST1H3AP68431 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H3AP68431 AL391422.3-201ENST00000603791 2761 ntBASIC17.6■□□□□ 0.41
HIST1H3AP68431 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 AC026185.1-201ENST00000445748 174 ntBASIC17.59■□□□□ 0.41
HIST1H3AP68431 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 AL589743.5-201ENST00000616611 1050 ntBASIC17.59■□□□□ 0.41
HIST1H3AP68431 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 AC112907.3-201ENST00000577781 2400 ntBASIC17.59■□□□□ 0.41
HIST1H3AP68431 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIST1H3AP68431 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
HIST1H3AP68431 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HIST1H3AP68431 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.58■□□□□ 0.41
HIST1H3AP68431 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.58■□□□□ 0.41
HIST1H3AP68431 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST1H3AP68431 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
HIST1H3AP68431 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIST1H3AP68431 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIST1H3AP68431 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.58■□□□□ 0.4
HIST1H3AP68431 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIST1H3AP68431 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.58■□□□□ 0.4
HIST1H3AP68431 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HIST1H3AP68431 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HIST1H3AP68431 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 KRT17P1-201ENST00000399211 1546 ntBASIC17.57■□□□□ 0.4
HIST1H3AP68431 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST1H3AP68431 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST1H3AP68431 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HIST1H3AP68431 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 KRT8P17-201ENST00000453110 1448 ntBASIC17.56■□□□□ 0.4
HIST1H3AP68431 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms