Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RAB11AP62491 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB11AP62491 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB11AP62491 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB11AP62491 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB11AP62491 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB11AP62491 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB11AP62491 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB11AP62491 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB11AP62491 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB11AP62491 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB11AP62491 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB11AP62491 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB11AP62491 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB11AP62491 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB11AP62491 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB11AP62491 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB11AP62491 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB11AP62491 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
RAB11AP62491 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB11AP62491 AC061975.6-201ENST00000579045 1553 ntBASIC16.3■□□□□ 0.2
RAB11AP62491 TNXA-203ENST00000507684 2038 ntBASIC16.29■□□□□ 0.2
RAB11AP62491 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB11AP62491 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB11AP62491 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAB11AP62491 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB11AP62491 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 AC027682.1-201ENST00000562846 899 ntBASIC16.29■□□□□ 0.2
RAB11AP62491 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB11AP62491 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB11AP62491 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB11AP62491 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB11AP62491 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB11AP62491 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB11AP62491 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RAB11AP62491 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RAB11AP62491 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB11AP62491 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB11AP62491 AC099791.1-201ENST00000416440 715 ntBASIC16.28■□□□□ 0.2
RAB11AP62491 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB11AP62491 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB11AP62491 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB11AP62491 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB11AP62491 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB11AP62491 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB11AP62491 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB11AP62491 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB11AP62491 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB11AP62491 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms