Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KRT16P2-201ENST00000414673 1423 ntBASIC18.36■□□□□ 0.53
CDC42P60953 DPP3P2-201ENST00000416030 1696 ntBASIC18.36■□□□□ 0.53
CDC42P60953 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDC42P60953 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC42P60953 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC42P60953 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDC42P60953 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC42P60953 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 AL691432.2-201ENST00000607222 2038 ntBASIC18.36■□□□□ 0.53
CDC42P60953 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42P60953 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDC42P60953 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CDC42P60953 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC42P60953 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 AC008764.7-201ENST00000593779 1081 ntBASIC18.35■□□□□ 0.53
CDC42P60953 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC42P60953 AC120498.10-201ENST00000621827 505 ntBASIC18.35■□□□□ 0.53
CDC42P60953 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC42P60953 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC42P60953 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC42P60953 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDC42P60953 AC004408.2-201ENST00000623613 2777 ntBASIC18.35■□□□□ 0.53
CDC42P60953 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42P60953 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42P60953 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42P60953 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC42P60953 AC024257.2-201ENST00000549699 147 ntBASIC18.34■□□□□ 0.53
CDC42P60953 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC42P60953 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42P60953 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42P60953 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42P60953 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42P60953 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CDC42P60953 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42P60953 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42P60953 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42P60953 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42P60953 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42P60953 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC42P60953 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42P60953 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
CDC42P60953 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC42P60953 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 AC093484.2-201ENST00000580996 2166 ntBASIC18.33■□□□□ 0.52
CDC42P60953 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDC42P60953 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CDC42P60953 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC42P60953 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 MIR572-201ENST00000384983 95 ntBASIC18.33■□□□□ 0.52
CDC42P60953 AC099791.1-201ENST00000416440 715 ntBASIC18.33■□□□□ 0.52
CDC42P60953 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC42P60953 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC42P60953 BX119927.1-201ENST00000636596 1552 ntBASIC18.33■□□□□ 0.52
CDC42P60953 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC42P60953 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42P60953 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDC42P60953 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDC42P60953 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC42P60953 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDC42P60953 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDC42P60953 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDC42P60953 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC42P60953 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC42P60953 AL136116.3-201ENST00000402907 1138 ntBASIC18.32■□□□□ 0.52
CDC42P60953 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC42P60953 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms