Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.01■□□□□ 0.63
CLK3P49761 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.01■□□□□ 0.63
CLK3P49761 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CLK3P49761 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLK3P49761 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CLK3P49761 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.01■□□□□ 0.63
CLK3P49761 AC004911.1-201ENST00000416316 871 ntBASIC19.01■□□□□ 0.63
CLK3P49761 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.01■□□□□ 0.63
CLK3P49761 MFSD11-216ENST00000590393 1141 ntBASIC19.01■□□□□ 0.63
CLK3P49761 IKBKGP1-201ENST00000612193 1073 ntBASIC19.01■□□□□ 0.63
CLK3P49761 AC231657.2-201ENST00000624556 255 ntBASIC19.01■□□□□ 0.63
CLK3P49761 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.01■□□□□ 0.63
CLK3P49761 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.01■□□□□ 0.63
CLK3P49761 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CLK3P49761 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLK3P49761 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.01■□□□□ 0.63
CLK3P49761 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.01■□□□□ 0.63
CLK3P49761 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLK3P49761 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.01■□□□□ 0.63
CLK3P49761 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK3P49761 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19■□□□□ 0.63
CLK3P49761 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLK3P49761 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 AL020996.1-203ENST00000536896 2307 ntBASIC19■□□□□ 0.63
CLK3P49761 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19■□□□□ 0.63
CLK3P49761 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19■□□□□ 0.63
CLK3P49761 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19■□□□□ 0.63
CLK3P49761 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 FP700111.2-201ENST00000619190 1892 ntBASIC19■□□□□ 0.63
CLK3P49761 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLK3P49761 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLK3P49761 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLK3P49761 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CLK3P49761 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLK3P49761 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLK3P49761 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK3P49761 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK3P49761 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLK3P49761 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.99■□□□□ 0.63
CLK3P49761 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLK3P49761 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK3P49761 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK3P49761 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
CLK3P49761 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLK3P49761 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK3P49761 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.99■□□□□ 0.63
CLK3P49761 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLK3P49761 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLK3P49761 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 SMG8-203ENST00000578922 2178 ntBASIC18.98■□□□□ 0.63
CLK3P49761 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.98■□□□□ 0.63
CLK3P49761 AC007322.1-201ENST00000426983 750 ntBASIC18.98■□□□□ 0.63
CLK3P49761 AL591742.1-201ENST00000604433 565 ntBASIC18.98■□□□□ 0.63
CLK3P49761 AC080038.1-201ENST00000611274 1154 ntBASIC18.98■□□□□ 0.63
CLK3P49761 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CLK3P49761 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.98■□□□□ 0.63
CLK3P49761 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLK3P49761 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLK3P49761 AC116050.2-201ENST00000612102 1779 ntBASIC18.98■□□□□ 0.63
CLK3P49761 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK3P49761 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CLK3P49761 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.97■□□□□ 0.63
CLK3P49761 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.97■□□□□ 0.63
CLK3P49761 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.97■□□□□ 0.63
CLK3P49761 AC007322.4-201ENST00000509611 723 ntBASIC18.97■□□□□ 0.63
CLK3P49761 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.97■□□□□ 0.63
CLK3P49761 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms