Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT6CP48668 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT6CP48668 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT6CP48668 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 CYP21A1P-202ENST00000354927 1481 ntBASIC19.48■□□□□ 0.71
KRT6CP48668 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT6CP48668 AC016769.1-201ENST00000409132 1010 ntBASIC19.48■□□□□ 0.71
KRT6CP48668 KRT18P5-201ENST00000436075 1291 ntBASIC19.48■□□□□ 0.71
KRT6CP48668 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.48■□□□□ 0.71
KRT6CP48668 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT6CP48668 AFG3L1P-217ENST00000557444 2447 ntBASIC19.48■□□□□ 0.71
KRT6CP48668 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
KRT6CP48668 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6CP48668 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KRT6CP48668 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6CP48668 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT6CP48668 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT6CP48668 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.47■□□□□ 0.71
KRT6CP48668 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6CP48668 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6CP48668 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6CP48668 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6CP48668 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6CP48668 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6CP48668 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT6CP48668 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6CP48668 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT6CP48668 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6CP48668 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT6CP48668 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6CP48668 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6CP48668 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT6CP48668 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6CP48668 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KRT6CP48668 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT6CP48668 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KRT6CP48668 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
KRT6CP48668 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.46■□□□□ 0.71
KRT6CP48668 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT6CP48668 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.46■□□□□ 0.71
KRT6CP48668 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6CP48668 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6CP48668 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT6CP48668 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT6CP48668 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
KRT6CP48668 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT6CP48668 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
KRT6CP48668 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT6CP48668 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT6CP48668 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT6CP48668 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT6CP48668 MFSD11-216ENST00000590393 1141 ntBASIC19.45■□□□□ 0.7
KRT6CP48668 AC016405.3-201ENST00000607710 860 ntBASIC19.45■□□□□ 0.7
KRT6CP48668 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
KRT6CP48668 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
KRT6CP48668 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT6CP48668 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6CP48668 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
KRT6CP48668 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT6CP48668 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT6CP48668 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
KRT6CP48668 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT6CP48668 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6CP48668 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT6CP48668 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6CP48668 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms