Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.99□□□□□ -0.17
PCP4P48539 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.99□□□□□ -0.17
PCP4P48539 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCP4P48539 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.98□□□□□ -0.17
PCP4P48539 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.98□□□□□ -0.17
PCP4P48539 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.98□□□□□ -0.17
PCP4P48539 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 AC022211.2-201ENST00000585075 2527 ntBASIC13.98□□□□□ -0.17
PCP4P48539 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.98□□□□□ -0.17
PCP4P48539 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCP4P48539 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.97□□□□□ -0.17
PCP4P48539 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.97□□□□□ -0.17
PCP4P48539 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC13.97□□□□□ -0.17
PCP4P48539 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PCP4P48539 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC13.97□□□□□ -0.17
PCP4P48539 NFIC-211ENST00000641145 8399 ntBASIC13.97□□□□□ -0.17
PCP4P48539 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.97□□□□□ -0.17
PCP4P48539 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
PCP4P48539 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
PCP4P48539 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCP4P48539 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCP4P48539 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
PCP4P48539 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.96□□□□□ -0.17
PCP4P48539 AC092068.2-201ENST00000590491 1708 ntBASIC13.96□□□□□ -0.17
PCP4P48539 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PCP4P48539 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
PCP4P48539 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.96□□□□□ -0.17
PCP4P48539 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
PCP4P48539 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCP4P48539 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.96□□□□□ -0.17
PCP4P48539 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PCP4P48539 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
PCP4P48539 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
PCP4P48539 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
PCP4P48539 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms