Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YNL146WYNL146W 303 nt1.49□□□□□ -2.17
SSN8P47821 RPB10YOR210W 213 nt1.49□□□□□ -2.17
SSN8P47821 MUK1YPL070W 1839 nt1.49□□□□□ -2.17
SSN8P47821 MLH3YPL164C 2148 nt1.48□□□□□ -2.17
SSN8P47821 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
SSN8P47821 YPR010C-AYPR010C-A 219 nt1.48□□□□□ -2.17
SSN8P47821 SKI3YPR189W 4299 nt1.48□□□□□ -2.17
SSN8P47821 INP2YMR163C 2118 nt1.48□□□□□ -2.17
SSN8P47821 ATG11YPR049C 3537 nt1.47□□□□□ -2.17
SSN8P47821 NPC2YDL046W 522 nt1.47□□□□□ -2.17
SSN8P47821 YDR183C-AYDR183C-A 258 nt1.47□□□□□ -2.17
SSN8P47821 YLR255CYLR255C 354 nt1.47□□□□□ -2.17
SSN8P47821 RIM20YOR275C 1986 nt1.47□□□□□ -2.17
SSN8P47821 CFT1YDR301W 4074 nt1.46□□□□□ -2.18
SSN8P47821 YFL063WYFL063W 456 nt1.46□□□□□ -2.18
SSN8P47821 tQ(UUG)E2tQ(UUG)E2 72 nt1.46□□□□□ -2.18
SSN8P47821 YJL022WYJL022W 309 nt1.46□□□□□ -2.18
SSN8P47821 YAR029WYAR029W 225 nt1.46□□□□□ -2.18
SSN8P47821 SPO24YPR036W-A 204 nt1.46□□□□□ -2.18
SSN8P47821 PIG1YLR273C 1947 nt1.46□□□□□ -2.18
SSN8P47821 MPT5YGL178W 2580 nt1.46□□□□□ -2.18
SSN8P47821 AI5_ALPHAQ0070 1893 nt1.46□□□□□ -2.18
SSN8P47821 HMI1YOL095C 2121 nt1.45□□□□□ -2.18
SSN8P47821 DCP2YNL118C 2913 nt1.45□□□□□ -2.18
SSN8P47821 FRK1YPL141C 2598 nt1.45□□□□□ -2.18
SSN8P47821 YDR169C-AYDR169C-A 150 nt1.45□□□□□ -2.18
SSN8P47821 SDH2YLL041C 801 nt1.45□□□□□ -2.18
SSN8P47821 YNL277W-AYNL277W-A 189 nt1.45□□□□□ -2.18
SSN8P47821 YOL160WYOL160W 342 nt1.45□□□□□ -2.18
SSN8P47821 APL2YKL135C 2181 nt1.45□□□□□ -2.18
SSN8P47821 NIP100YPL174C 2607 nt1.45□□□□□ -2.18
SSN8P47821 SFB2YNL049C 2631 nt1.44□□□□□ -2.18
SSN8P47821 SLY1YDR189W 2001 nt1.44□□□□□ -2.18
SSN8P47821 YMR242W-AYMR242W-A 90 nt1.44□□□□□ -2.18
SSN8P47821 YSY6YBR162W-A 198 nt1.44□□□□□ -2.18
SSN8P47821 SXM1YDR395W 2835 nt1.44□□□□□ -2.18
SSN8P47821 SPC98YNL126W 2541 nt1.44□□□□□ -2.18
SSN8P47821 DGR2YKL121W 2559 nt1.43□□□□□ -2.18
SSN8P47821 PCC1YKR095W-A 267 nt1.43□□□□□ -2.18
SSN8P47821 YBL008W-AYBL008W-A 240 nt1.43□□□□□ -2.18
SSN8P47821 YMR175W-AYMR175W-A 195 nt1.43□□□□□ -2.18
SSN8P47821 STE5YDR103W 2754 nt1.43□□□□□ -2.18
SSN8P47821 ALK1YGL021W 2283 nt1.42□□□□□ -2.18
SSN8P47821 SMC4YLR086W 4257 nt1.42□□□□□ -2.18
SSN8P47821 DBP6YNR038W 1890 nt1.42□□□□□ -2.18
SSN8P47821 CTF4YPR135W 2784 nt1.42□□□□□ -2.18
SSN8P47821 POL5YEL055C 3069 nt1.42□□□□□ -2.18
SSN8P47821 YDR344CYDR344C 444 nt1.41□□□□□ -2.18
SSN8P47821 ZIP2YGL249W 2115 nt1.41□□□□□ -2.18
SSN8P47821 COF1YLL050C 432 nt1.41□□□□□ -2.18
SSN8P47821 snR14snR14 160 nt1.41□□□□□ -2.18
SSN8P47821 KAP122YGL016W 3246 nt1.41□□□□□ -2.18
SSN8P47821 SEC21YNL287W 2808 nt1.4□□□□□ -2.18
SSN8P47821 SSS1YDR086C 243 nt1.4□□□□□ -2.19
SSN8P47821 MAM33YIL070C 801 nt1.4□□□□□ -2.19
SSN8P47821 YMR031W-AYMR031W-A 327 nt1.4□□□□□ -2.19
SSN8P47821 SAS3YBL052C 2496 nt1.4□□□□□ -2.19
SSN8P47821 HTL1YCR020W-B 237 nt1.39□□□□□ -2.19
SSN8P47821 YIL115W-AYIL115W-A 372 nt1.39□□□□□ -2.19
SSN8P47821 INA22YIR024C 651 nt1.39□□□□□ -2.19
SSN8P47821 YOR231C-AYOR231C-A 201 nt1.39□□□□□ -2.19
SSN8P47821 RAD34YDR314C 2079 nt1.39□□□□□ -2.19
SSN8P47821 RAD50YNL250W 3939 nt1.39□□□□□ -2.19
SSN8P47821 BST1YFL025C 3090 nt1.38□□□□□ -2.19
SSN8P47821 CCH1YGR217W 6120 nt1.38□□□□□ -2.19
SSN8P47821 YGL217CYGL217C 342 nt1.38□□□□□ -2.19
SSN8P47821 YIL102CYIL102C 306 nt1.38□□□□□ -2.19
SSN8P47821 YPR063CYPR063C 423 nt1.38□□□□□ -2.19
SSN8P47821 MAD1YGL086W 2250 nt1.38□□□□□ -2.19
SSN8P47821 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
SSN8P47821 FIG2YCR089W 4830 nt1.37□□□□□ -2.19
SSN8P47821 EMC5YIL027C 426 nt1.37□□□□□ -2.19
SSN8P47821 YMR193C-AYMR193C-A 387 nt1.37□□□□□ -2.19
SSN8P47821 NOC3YLR002C 1992 nt1.36□□□□□ -2.19
SSN8P47821 PBY1YBR094W 2262 nt1.36□□□□□ -2.19
SSN8P47821 VPS55YJR044C 423 nt1.36□□□□□ -2.19
SSN8P47821 AHC1YOR023C 1701 nt1.36□□□□□ -2.19
SSN8P47821 SLX4YLR135W 2247 nt1.36□□□□□ -2.19
SSN8P47821 UFD2YDL190C 2886 nt1.36□□□□□ -2.19
SSN8P47821 NCA2YPR155C 1851 nt1.35□□□□□ -2.19
SSN8P47821 NUT1YGL151W 3399 nt1.35□□□□□ -2.19
SSN8P47821 ALG13YGL047W 609 nt1.35□□□□□ -2.19
SSN8P47821 COA6YMR244C-A 315 nt1.35□□□□□ -2.19
SSN8P47821 TRM3YDL112W 4311 nt1.35□□□□□ -2.19
SSN8P47821 REV3YPL167C 4515 nt1.35□□□□□ -2.19
SSN8P47821 SPO75YLL005C 2607 nt1.35□□□□□ -2.19
SSN8P47821 YCK3YER123W 1575 nt1.34□□□□□ -2.19
SSN8P47821 OST1YJL002C 1431 nt1.34□□□□□ -2.19
SSN8P47821 SCW11YGL028C 1629 nt1.34□□□□□ -2.19
SSN8P47821 YGL149WYGL149W 306 nt1.34□□□□□ -2.19
SSN8P47821 YIL032CYIL032C 357 nt1.34□□□□□ -2.19
SSN8P47821 RPL39YJL189W 156 nt1.34□□□□□ -2.19
SSN8P47821 YLR140WYLR140W 327 nt1.34□□□□□ -2.19
SSN8P47821 YCS4YLR272C 3531 nt1.33□□□□□ -2.2
SSN8P47821 snR60snR60 104 nt1.33□□□□□ -2.2
SSN8P47821 snR65snR65 100 nt1.33□□□□□ -2.2
SSN8P47821 CDC36YDL165W 576 nt1.33□□□□□ -2.2
SSN8P47821 SLD3YGL113W 2007 nt1.33□□□□□ -2.2
SSN8P47821 BRR2YER172C 6492 nt1.33□□□□□ -2.2
SSN8P47821 YOR108C-AYOR108C-A 210 nt1.32□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms