Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARSP26640 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARSP26640 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARSP26640 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARSP26640 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VARSP26640 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VARSP26640 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VARSP26640 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.72■□□□□ 0.75
VARSP26640 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARSP26640 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARSP26640 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARSP26640 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARSP26640 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VARSP26640 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARSP26640 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARSP26640 AC068338.2-201ENST00000563278 1430 ntBASIC19.72■□□□□ 0.75
VARSP26640 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARSP26640 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VARSP26640 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.72■□□□□ 0.75
VARSP26640 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARSP26640 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.72■□□□□ 0.75
VARSP26640 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.72■□□□□ 0.75
VARSP26640 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
VARSP26640 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.72■□□□□ 0.75
VARSP26640 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VARSP26640 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
VARSP26640 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.71■□□□□ 0.75
VARSP26640 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
VARSP26640 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VARSP26640 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.71■□□□□ 0.75
VARSP26640 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 FAM201B-201ENST00000458407 597 ntBASIC19.71■□□□□ 0.75
VARSP26640 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.71■□□□□ 0.75
VARSP26640 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.71■□□□□ 0.75
VARSP26640 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.71■□□□□ 0.75
VARSP26640 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.71■□□□□ 0.75
VARSP26640 AC066615.1-201ENST00000640911 628 ntBASIC19.71■□□□□ 0.75
VARSP26640 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VARSP26640 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.71■□□□□ 0.75
VARSP26640 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARSP26640 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
VARSP26640 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARSP26640 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.7■□□□□ 0.74
VARSP26640 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VARSP26640 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARSP26640 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VARSP26640 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.7■□□□□ 0.74
VARSP26640 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
VARSP26640 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARSP26640 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARSP26640 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.7■□□□□ 0.74
VARSP26640 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARSP26640 AC005181.1-201ENST00000604782 1256 ntBASIC19.7■□□□□ 0.74
VARSP26640 FAM21FP-204ENST00000608637 956 ntBASIC19.7■□□□□ 0.74
VARSP26640 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VARSP26640 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.7■□□□□ 0.74
VARSP26640 AC133041.1-202ENST00000642053 222 ntBASIC19.7■□□□□ 0.74
VARSP26640 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARSP26640 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
VARSP26640 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VARSP26640 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.7■□□□□ 0.74
VARSP26640 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.7■□□□□ 0.74
VARSP26640 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VARSP26640 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.7■□□□□ 0.74
VARSP26640 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.69■□□□□ 0.74
VARSP26640 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARSP26640 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.69■□□□□ 0.74
VARSP26640 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARSP26640 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARSP26640 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.69■□□□□ 0.74
VARSP26640 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.69■□□□□ 0.74
VARSP26640 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VARSP26640 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VARSP26640 TSPY20P-201ENST00000450910 630 ntBASIC19.69■□□□□ 0.74
VARSP26640 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.69■□□□□ 0.74
VARSP26640 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.69■□□□□ 0.74
VARSP26640 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARSP26640 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VARSP26640 AL162377.1-201ENST00000618844 1793 ntBASIC19.69■□□□□ 0.74
VARSP26640 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.69■□□□□ 0.74
VARSP26640 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.69■□□□□ 0.74
VARSP26640 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
VARSP26640 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VARSP26640 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.69■□□□□ 0.74
VARSP26640 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARSP26640 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VARSP26640 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.69■□□□□ 0.74
VARSP26640 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
VARSP26640 AL512408.1-201ENST00000569378 2000 ntBASIC19.68■□□□□ 0.74
VARSP26640 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms