Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 KRT18P60-201ENST00000312876 1297 ntBASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 AC092720.2-201ENST00000602388 1665 ntBASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2AFB1P0C5Y9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 AC133637.1-201ENST00000624115 1537 ntBASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.22■□□□□ 0.19
H2AFB1P0C5Y9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 AL139384.1-201ENST00000612143 3047 ntBASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 AC010141.3-201ENST00000456659 717 ntBASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 Z92544.1-202ENST00000571933 1220 ntBASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 AL451085.2-201ENST00000605085 799 ntBASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H2AFB1P0C5Y9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms