Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FREM3P0C091 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.31■□□□□ 0.52
FREM3P0C091 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.31■□□□□ 0.52
FREM3P0C091 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FREM3P0C091 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.3■□□□□ 0.52
FREM3P0C091 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FREM3P0C091 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FREM3P0C091 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM3P0C091 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.3■□□□□ 0.52
FREM3P0C091 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.3■□□□□ 0.52
FREM3P0C091 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.3■□□□□ 0.52
FREM3P0C091 AC233263.1-201ENST00000578059 224 ntBASIC18.3■□□□□ 0.52
FREM3P0C091 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.3■□□□□ 0.52
FREM3P0C091 AC121338.2-201ENST00000622535 1744 ntBASIC18.3■□□□□ 0.52
FREM3P0C091 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM3P0C091 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM3P0C091 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM3P0C091 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.3■□□□□ 0.52
FREM3P0C091 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.3■□□□□ 0.52
FREM3P0C091 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
FREM3P0C091 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FREM3P0C091 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FREM3P0C091 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.29■□□□□ 0.52
FREM3P0C091 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FREM3P0C091 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FREM3P0C091 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.29■□□□□ 0.52
FREM3P0C091 GCSHP5-201ENST00000443090 522 ntBASIC18.29■□□□□ 0.52
FREM3P0C091 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.29■□□□□ 0.52
FREM3P0C091 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.29■□□□□ 0.52
FREM3P0C091 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FREM3P0C091 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.29■□□□□ 0.52
FREM3P0C091 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.29■□□□□ 0.52
FREM3P0C091 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
FREM3P0C091 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.29■□□□□ 0.52
FREM3P0C091 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.29■□□□□ 0.52
FREM3P0C091 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
FREM3P0C091 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
FREM3P0C091 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.29■□□□□ 0.52
FREM3P0C091 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
FREM3P0C091 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
FREM3P0C091 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FREM3P0C091 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.28■□□□□ 0.52
FREM3P0C091 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.28■□□□□ 0.52
FREM3P0C091 AL158047.1-201ENST00000445918 881 ntBASIC18.28■□□□□ 0.52
FREM3P0C091 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FREM3P0C091 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.28■□□□□ 0.52
FREM3P0C091 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.28■□□□□ 0.52
FREM3P0C091 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FREM3P0C091 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FREM3P0C091 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.27■□□□□ 0.52
FREM3P0C091 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FREM3P0C091 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FREM3P0C091 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FREM3P0C091 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FREM3P0C091 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.27■□□□□ 0.52
FREM3P0C091 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
FREM3P0C091 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.27■□□□□ 0.52
FREM3P0C091 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FREM3P0C091 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
FREM3P0C091 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FREM3P0C091 AC007225.1-201ENST00000566331 1836 ntBASIC18.27■□□□□ 0.51
FREM3P0C091 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FREM3P0C091 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.27■□□□□ 0.51
FREM3P0C091 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FREM3P0C091 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
FREM3P0C091 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
FREM3P0C091 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
FREM3P0C091 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.26■□□□□ 0.51
FREM3P0C091 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.26■□□□□ 0.51
FREM3P0C091 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms