Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
IFNA1P01562 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.94■□□□□ 0.14
IFNA1P01562 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.94■□□□□ 0.14
IFNA1P01562 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.94■□□□□ 0.14
IFNA1P01562 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
IFNA1P01562 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
IFNA1P01562 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
IFNA1P01562 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
IFNA1P01562 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.94■□□□□ 0.14
IFNA1P01562 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IFNA1P01562 TMEM179-206ENST00000616017 1645 ntBASIC15.94■□□□□ 0.14
IFNA1P01562 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.93■□□□□ 0.14
IFNA1P01562 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
IFNA1P01562 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.93■□□□□ 0.14
IFNA1P01562 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.93■□□□□ 0.14
IFNA1P01562 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.93■□□□□ 0.14
IFNA1P01562 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
IFNA1P01562 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.93■□□□□ 0.14
IFNA1P01562 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
IFNA1P01562 PVT1_1.1-201ENST00000615125 194 ntBASIC15.93■□□□□ 0.14
IFNA1P01562 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.93■□□□□ 0.14
IFNA1P01562 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
IFNA1P01562 NEFHP1-201ENST00000412845 2629 ntBASIC15.93■□□□□ 0.14
IFNA1P01562 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
IFNA1P01562 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.93■□□□□ 0.14
IFNA1P01562 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
IFNA1P01562 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IFNA1P01562 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
IFNA1P01562 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
IFNA1P01562 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
IFNA1P01562 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.92■□□□□ 0.14
IFNA1P01562 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
IFNA1P01562 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.92■□□□□ 0.14
IFNA1P01562 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.92■□□□□ 0.14
IFNA1P01562 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.92■□□□□ 0.14
IFNA1P01562 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.92■□□□□ 0.14
IFNA1P01562 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.92■□□□□ 0.14
IFNA1P01562 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.92■□□□□ 0.14
IFNA1P01562 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IFNA1P01562 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.91■□□□□ 0.14
IFNA1P01562 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.91■□□□□ 0.14
IFNA1P01562 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
IFNA1P01562 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.91■□□□□ 0.14
IFNA1P01562 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.91■□□□□ 0.14
IFNA1P01562 OR2I1P-207ENST00000453522 948 ntBASIC15.91■□□□□ 0.14
IFNA1P01562 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.91■□□□□ 0.14
IFNA1P01562 pRNA.6-201ENST00000610482 90 ntBASIC15.91■□□□□ 0.14
IFNA1P01562 pRNA.5-201ENST00000612139 90 ntBASIC15.91■□□□□ 0.14
IFNA1P01562 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms