Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
PGK1P00558 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PGK1P00558 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PGK1P00558 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.51■■□□□ 1.19
PGK1P00558 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.51■■□□□ 1.19
PGK1P00558 AC004264.1-201ENST00000608354 794 ntBASIC22.51■■□□□ 1.19
PGK1P00558 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.51■■□□□ 1.19
PGK1P00558 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PGK1P00558 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PGK1P00558 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PGK1P00558 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.5■■□□□ 1.19
PGK1P00558 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PGK1P00558 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PGK1P00558 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.5■■□□□ 1.19
PGK1P00558 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PGK1P00558 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.5■■□□□ 1.19
PGK1P00558 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PGK1P00558 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PGK1P00558 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.5■■□□□ 1.19
PGK1P00558 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.5■■□□□ 1.19
PGK1P00558 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.5■■□□□ 1.19
PGK1P00558 AL031963.3-201ENST00000606441 850 ntBASIC22.5■■□□□ 1.19
PGK1P00558 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PGK1P00558 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
PGK1P00558 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PGK1P00558 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.5■■□□□ 1.19
PGK1P00558 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PGK1P00558 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGK1P00558 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGK1P00558 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGK1P00558 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PGK1P00558 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGK1P00558 AL390955.1-201ENST00000428694 934 ntBASIC22.49■■□□□ 1.19
PGK1P00558 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.49■■□□□ 1.19
PGK1P00558 KRT18P57-201ENST00000443599 1254 ntBASIC22.49■■□□□ 1.19
PGK1P00558 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PGK1P00558 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.49■■□□□ 1.19
PGK1P00558 MIR2861-201ENST00000636310 90 ntBASIC22.49■■□□□ 1.19
PGK1P00558 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.49■■□□□ 1.19
PGK1P00558 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.49■■□□□ 1.19
PGK1P00558 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PGK1P00558 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGK1P00558 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGK1P00558 LINC01568-207ENST00000641790 1380 ntBASIC22.49■■□□□ 1.19
PGK1P00558 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.49■■□□□ 1.19
PGK1P00558 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.48■■□□□ 1.19
PGK1P00558 CYP2D8P-201ENST00000433633 1490 ntBASIC22.48■■□□□ 1.19
PGK1P00558 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PGK1P00558 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PGK1P00558 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PGK1P00558 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PGK1P00558 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.48■■□□□ 1.19
PGK1P00558 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
PGK1P00558 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PGK1P00558 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PGK1P00558 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PGK1P00558 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PGK1P00558 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PGK1P00558 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PGK1P00558 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PGK1P00558 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PGK1P00558 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.47■■□□□ 1.19
PGK1P00558 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGK1P00558 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.47■■□□□ 1.19
PGK1P00558 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PGK1P00558 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.47■■□□□ 1.19
PGK1P00558 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.47■■□□□ 1.19
PGK1P00558 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.47■■□□□ 1.19
PGK1P00558 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.47■■□□□ 1.19
PGK1P00558 CR392000.1-201ENST00000624770 1228 ntBASIC22.47■■□□□ 1.19
PGK1P00558 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.47■■□□□ 1.19
PGK1P00558 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGK1P00558 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.47■■□□□ 1.19
PGK1P00558 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PGK1P00558 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PGK1P00558 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGK1P00558 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGK1P00558 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGK1P00558 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
PGK1P00558 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PGK1P00558 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGK1P00558 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGK1P00558 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.46■■□□□ 1.19
PGK1P00558 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGK1P00558 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.46■■□□□ 1.19
PGK1P00558 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGK1P00558 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGK1P00558 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGK1P00558 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
PGK1P00558 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGK1P00558 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.46■■□□□ 1.19
PGK1P00558 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGK1P00558 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PGK1P00558 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PGK1P00558 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.45■■□□□ 1.18
PGK1P00558 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGK1P00558 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms