Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRUB2O95900 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.12■□□□□ 0.97
TRUB2O95900 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 AC083880.1-201ENST00000608266 535 ntBASIC21.12■□□□□ 0.97
TRUB2O95900 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 AL391422.3-201ENST00000603791 2761 ntBASIC21.12■□□□□ 0.97
TRUB2O95900 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.11■□□□□ 0.97
TRUB2O95900 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.11■□□□□ 0.97
TRUB2O95900 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.11■□□□□ 0.97
TRUB2O95900 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB2O95900 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.11■□□□□ 0.97
TRUB2O95900 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.11■□□□□ 0.97
TRUB2O95900 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.1■□□□□ 0.97
TRUB2O95900 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.1■□□□□ 0.97
TRUB2O95900 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.1■□□□□ 0.97
TRUB2O95900 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB2O95900 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB2O95900 DPP3P2-201ENST00000416030 1696 ntBASIC21.1■□□□□ 0.97
TRUB2O95900 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.1■□□□□ 0.97
TRUB2O95900 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB2O95900 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.1■□□□□ 0.97
TRUB2O95900 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.1■□□□□ 0.97
TRUB2O95900 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB2O95900 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB2O95900 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRUB2O95900 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB2O95900 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB2O95900 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB2O95900 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.09■□□□□ 0.97
TRUB2O95900 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.09■□□□□ 0.97
TRUB2O95900 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB2O95900 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB2O95900 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB2O95900 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB2O95900 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.09■□□□□ 0.97
TRUB2O95900 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TRUB2O95900 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.09■□□□□ 0.97
TRUB2O95900 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.09■□□□□ 0.97
TRUB2O95900 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.09■□□□□ 0.97
TRUB2O95900 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.09■□□□□ 0.97
TRUB2O95900 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRUB2O95900 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
TRUB2O95900 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB2O95900 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.09■□□□□ 0.97
TRUB2O95900 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRUB2O95900 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB2O95900 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TRUB2O95900 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB2O95900 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.08■□□□□ 0.97
TRUB2O95900 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.08■□□□□ 0.97
TRUB2O95900 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB2O95900 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB2O95900 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB2O95900 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB2O95900 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB2O95900 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TRUB2O95900 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TRUB2O95900 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.08■□□□□ 0.97
TRUB2O95900 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRUB2O95900 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRUB2O95900 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRUB2O95900 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRUB2O95900 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRUB2O95900 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 AC112907.3-201ENST00000577781 2400 ntBASIC21.07■□□□□ 0.96
TRUB2O95900 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.07■□□□□ 0.96
TRUB2O95900 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.07■□□□□ 0.96
TRUB2O95900 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.07■□□□□ 0.96
TRUB2O95900 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TRUB2O95900 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.07■□□□□ 0.96
TRUB2O95900 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.07■□□□□ 0.96
TRUB2O95900 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.07■□□□□ 0.96
TRUB2O95900 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.07■□□□□ 0.96
TRUB2O95900 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TRUB2O95900 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.07■□□□□ 0.96
TRUB2O95900 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms