Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
HERC2O95714 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
HERC2O95714 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.61□□□□□ -0.39
HERC2O95714 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.61□□□□□ -0.39
HERC2O95714 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HERC2O95714 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.61□□□□□ -0.39
HERC2O95714 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HERC2O95714 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HERC2O95714 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.61□□□□□ -0.39
HERC2O95714 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.6□□□□□ -0.39
HERC2O95714 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.6□□□□□ -0.39
HERC2O95714 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.6□□□□□ -0.39
HERC2O95714 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.6□□□□□ -0.39
HERC2O95714 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.6□□□□□ -0.39
HERC2O95714 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 HLA-G-203ENST00000376818 1127 ntBASIC12.6□□□□□ -0.39
HERC2O95714 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.6□□□□□ -0.39
HERC2O95714 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.6□□□□□ -0.39
HERC2O95714 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.6□□□□□ -0.39
HERC2O95714 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HERC2O95714 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HERC2O95714 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.6□□□□□ -0.39
HERC2O95714 AC011506.1-201ENST00000474329 610 ntBASIC12.6□□□□□ -0.39
HERC2O95714 KRT18P31-201ENST00000506277 1292 ntBASIC12.6□□□□□ -0.39
HERC2O95714 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.6□□□□□ -0.39
HERC2O95714 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HERC2O95714 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC12.6□□□□□ -0.39
HERC2O95714 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.6□□□□□ -0.39
HERC2O95714 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
HERC2O95714 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 AP002414.4-201ENST00000589764 1148 ntBASIC12.59□□□□□ -0.39
HERC2O95714 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.59□□□□□ -0.39
HERC2O95714 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.59□□□□□ -0.39
HERC2O95714 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.59□□□□□ -0.39
HERC2O95714 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.59□□□□□ -0.39
HERC2O95714 SART3-203ENST00000546611 1184 ntBASIC12.59□□□□□ -0.39
HERC2O95714 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.59□□□□□ -0.39
HERC2O95714 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.59□□□□□ -0.39
HERC2O95714 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC12.59□□□□□ -0.39
HERC2O95714 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC12.59□□□□□ -0.39
HERC2O95714 LINC00526-201ENST00000581067 1875 ntBASIC12.59□□□□□ -0.39
HERC2O95714 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.59□□□□□ -0.39
HERC2O95714 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.59□□□□□ -0.39
HERC2O95714 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HERC2O95714 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HERC2O95714 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC12.59□□□□□ -0.39
HERC2O95714 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
HERC2O95714 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HERC2O95714 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HERC2O95714 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.58□□□□□ -0.4
HERC2O95714 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 KRT18P58-201ENST00000527480 1120 ntBASIC12.58□□□□□ -0.4
HERC2O95714 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.58□□□□□ -0.4
HERC2O95714 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.58□□□□□ -0.4
HERC2O95714 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.58□□□□□ -0.4
HERC2O95714 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.58□□□□□ -0.4
HERC2O95714 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
HERC2O95714 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.58□□□□□ -0.4
HERC2O95714 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
HERC2O95714 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.58□□□□□ -0.4
HERC2O95714 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.58□□□□□ -0.4
HERC2O95714 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HERC2O95714 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms