Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.85■□□□□ 0.29
ABCA1O95477 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.85■□□□□ 0.29
ABCA1O95477 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.85■□□□□ 0.29
ABCA1O95477 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
ABCA1O95477 PRKY-204ENST00000533551 1019 ntBASIC16.85■□□□□ 0.29
ABCA1O95477 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.85■□□□□ 0.29
ABCA1O95477 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.85■□□□□ 0.29
ABCA1O95477 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ABCA1O95477 KRT18P35-201ENST00000510488 1269 ntBASIC16.85■□□□□ 0.29
ABCA1O95477 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ABCA1O95477 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA1O95477 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
ABCA1O95477 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
ABCA1O95477 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.85■□□□□ 0.29
ABCA1O95477 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.84■□□□□ 0.29
ABCA1O95477 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.84■□□□□ 0.29
ABCA1O95477 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ABCA1O95477 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.84■□□□□ 0.29
ABCA1O95477 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
ABCA1O95477 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.84■□□□□ 0.29
ABCA1O95477 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCA1O95477 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ABCA1O95477 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ABCA1O95477 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ABCA1O95477 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.84■□□□□ 0.29
ABCA1O95477 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.84■□□□□ 0.29
ABCA1O95477 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA1O95477 NUDT16P1-203ENST00000513809 620 ntBASIC16.84■□□□□ 0.29
ABCA1O95477 AC005829.2-201ENST00000571422 1056 ntBASIC16.84■□□□□ 0.29
ABCA1O95477 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCA1O95477 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.84■□□□□ 0.29
ABCA1O95477 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA1O95477 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA1O95477 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA1O95477 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.83■□□□□ 0.29
ABCA1O95477 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA1O95477 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA1O95477 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.83■□□□□ 0.29
ABCA1O95477 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ABCA1O95477 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.83■□□□□ 0.28
ABCA1O95477 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.83■□□□□ 0.28
ABCA1O95477 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ABCA1O95477 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 ECEL1P1-201ENST00000373592 1742 ntBASIC16.83■□□□□ 0.28
ABCA1O95477 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ABCA1O95477 CYP21A1P-202ENST00000354927 1481 ntBASIC16.82■□□□□ 0.28
ABCA1O95477 AF106564.1-201ENST00000607058 2553 ntBASIC16.82■□□□□ 0.28
ABCA1O95477 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ABCA1O95477 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCA1O95477 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.82■□□□□ 0.28
ABCA1O95477 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ABCA1O95477 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.82■□□□□ 0.28
ABCA1O95477 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ABCA1O95477 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.82■□□□□ 0.28
ABCA1O95477 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ABCA1O95477 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ABCA1O95477 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms