Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PRPF40AO75400 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 TMEM179-206ENST00000616017 1645 ntBASIC23.34■■□□□ 1.33
PRPF40AO75400 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
PRPF40AO75400 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.34■■□□□ 1.33
PRPF40AO75400 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.34■■□□□ 1.33
PRPF40AO75400 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.34■■□□□ 1.33
PRPF40AO75400 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 MIR5787-201ENST00000611784 55 ntBASIC23.34■■□□□ 1.33
PRPF40AO75400 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRPF40AO75400 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.33■■□□□ 1.33
PRPF40AO75400 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF40AO75400 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.33■■□□□ 1.33
PRPF40AO75400 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF40AO75400 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF40AO75400 DPP3P2-201ENST00000416030 1696 ntBASIC23.33■■□□□ 1.33
PRPF40AO75400 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF40AO75400 AC097381.1-201ENST00000429019 1296 ntBASIC23.33■■□□□ 1.33
PRPF40AO75400 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF40AO75400 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.33■■□□□ 1.33
PRPF40AO75400 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRPF40AO75400 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
PRPF40AO75400 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PRPF40AO75400 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
PRPF40AO75400 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PRPF40AO75400 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.33■■□□□ 1.32
PRPF40AO75400 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.33■■□□□ 1.32
PRPF40AO75400 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.32■■□□□ 1.32
PRPF40AO75400 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PRPF40AO75400 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 AC116050.2-201ENST00000612102 1779 ntBASIC23.32■■□□□ 1.32
PRPF40AO75400 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.32■■□□□ 1.32
PRPF40AO75400 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.32■■□□□ 1.32
PRPF40AO75400 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.32■■□□□ 1.32
PRPF40AO75400 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.32■■□□□ 1.32
PRPF40AO75400 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PRPF40AO75400 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRPF40AO75400 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.32■■□□□ 1.32
PRPF40AO75400 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.31■■□□□ 1.32
PRPF40AO75400 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.31■■□□□ 1.32
PRPF40AO75400 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.31■■□□□ 1.32
PRPF40AO75400 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.31■■□□□ 1.32
PRPF40AO75400 AC027612.3-201ENST00000413684 1047 ntBASIC23.31■■□□□ 1.32
PRPF40AO75400 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 AC245052.3-201ENST00000450182 901 ntBASIC23.31■■□□□ 1.32
PRPF40AO75400 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.31■■□□□ 1.32
PRPF40AO75400 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.31■■□□□ 1.32
PRPF40AO75400 AC087623.3-201ENST00000607047 1098 ntBASIC23.31■■□□□ 1.32
PRPF40AO75400 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.31■■□□□ 1.32
PRPF40AO75400 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PRPF40AO75400 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRPF40AO75400 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.31■■□□□ 1.32
PRPF40AO75400 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.3■■□□□ 1.32
PRPF40AO75400 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.3■■□□□ 1.32
PRPF40AO75400 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.3■■□□□ 1.32
PRPF40AO75400 TREX1-205ENST00000625293 1783 ntBASIC23.3■■□□□ 1.32
PRPF40AO75400 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PRPF40AO75400 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRPF40AO75400 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.3■■□□□ 1.32
PRPF40AO75400 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
PRPF40AO75400 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PRPF40AO75400 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF40AO75400 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF40AO75400 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF40AO75400 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF40AO75400 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRPF40AO75400 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms