Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.96■■□□□ 1.75
PTCD1O75127 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD1O75127 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.96■■□□□ 1.75
PTCD1O75127 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD1O75127 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.96■■□□□ 1.75
PTCD1O75127 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD1O75127 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD1O75127 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.96■■□□□ 1.75
PTCD1O75127 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD1O75127 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PTCD1O75127 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PTCD1O75127 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PTCD1O75127 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PTCD1O75127 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PTCD1O75127 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PTCD1O75127 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
PTCD1O75127 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PTCD1O75127 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PTCD1O75127 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PTCD1O75127 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.95■■□□□ 1.74
PTCD1O75127 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.95■■□□□ 1.74
PTCD1O75127 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.95■■□□□ 1.74
PTCD1O75127 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PTCD1O75127 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.94■■□□□ 1.74
PTCD1O75127 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD1O75127 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD1O75127 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD1O75127 MMP23A-201ENST00000234610 1017 ntBASIC25.94■■□□□ 1.74
PTCD1O75127 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
PTCD1O75127 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD1O75127 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.94■■□□□ 1.74
PTCD1O75127 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.94■■□□□ 1.74
PTCD1O75127 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD1O75127 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.94■■□□□ 1.74
PTCD1O75127 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.94■■□□□ 1.74
PTCD1O75127 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.94■■□□□ 1.74
PTCD1O75127 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD1O75127 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD1O75127 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
PTCD1O75127 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PTCD1O75127 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTCD1O75127 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTCD1O75127 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTCD1O75127 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTCD1O75127 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTCD1O75127 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.93■■□□□ 1.74
PTCD1O75127 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PTCD1O75127 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
PTCD1O75127 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.93■■□□□ 1.74
PTCD1O75127 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PTCD1O75127 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PTCD1O75127 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.93■■□□□ 1.74
PTCD1O75127 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
PTCD1O75127 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.92■■□□□ 1.74
PTCD1O75127 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
PTCD1O75127 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 AL353807.1-201ENST00000427475 662 ntBASIC25.92■■□□□ 1.74
PTCD1O75127 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.92■■□□□ 1.74
PTCD1O75127 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.92■■□□□ 1.74
PTCD1O75127 AL121906.2-201ENST00000621597 723 ntBASIC25.92■■□□□ 1.74
PTCD1O75127 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCD1O75127 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.92■■□□□ 1.74
PTCD1O75127 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.91■■□□□ 1.74
PTCD1O75127 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PTCD1O75127 AC121338.2-201ENST00000622535 1744 ntBASIC25.91■■□□□ 1.74
PTCD1O75127 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
PTCD1O75127 AC073195.1-201ENST00000607241 877 ntBASIC25.91■■□□□ 1.74
PTCD1O75127 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.91■■□□□ 1.74
PTCD1O75127 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PTCD1O75127 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PTCD1O75127 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.91■■□□□ 1.74
PTCD1O75127 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PTCD1O75127 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PTCD1O75127 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
PTCD1O75127 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.9■■□□□ 1.74
PTCD1O75127 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.9■■□□□ 1.74
PTCD1O75127 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.9■■□□□ 1.74
PTCD1O75127 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 RN7SL850P-201ENST00000579959 291 ntBASIC25.9■■□□□ 1.74
PTCD1O75127 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PTCD1O75127 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PTCD1O75127 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PTCD1O75127 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
PTCD1O75127 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCD1O75127 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms