Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 AL162430.1-201ENST00000480705 870 ntBASIC18.29■□□□□ 0.52
RNF13O43567 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RNF13O43567 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF13O43567 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF13O43567 AC013268.1-206ENST00000638368 961 ntBASIC18.29■□□□□ 0.52
RNF13O43567 AC112229.1-201ENST00000639295 961 ntBASIC18.29■□□□□ 0.52
RNF13O43567 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RNF13O43567 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF13O43567 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF13O43567 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF13O43567 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF13O43567 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF13O43567 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF13O43567 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF13O43567 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF13O43567 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RNF13O43567 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF13O43567 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF13O43567 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF13O43567 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF13O43567 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF13O43567 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF13O43567 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF13O43567 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF13O43567 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF13O43567 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF13O43567 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF13O43567 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF13O43567 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF13O43567 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF13O43567 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF13O43567 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF13O43567 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF13O43567 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF13O43567 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF13O43567 MFSD11-216ENST00000590393 1141 ntBASIC18.27■□□□□ 0.52
RNF13O43567 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF13O43567 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RNF13O43567 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF13O43567 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF13O43567 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF13O43567 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF13O43567 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RNF13O43567 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF13O43567 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF13O43567 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF13O43567 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RNF13O43567 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF13O43567 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.26■□□□□ 0.51
RNF13O43567 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF13O43567 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF13O43567 AC007322.4-201ENST00000509611 723 ntBASIC18.26■□□□□ 0.51
RNF13O43567 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF13O43567 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF13O43567 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF13O43567 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF13O43567 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
RNF13O43567 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF13O43567 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF13O43567 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF13O43567 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF13O43567 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF13O43567 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF13O43567 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF13O43567 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.25■□□□□ 0.51
RNF13O43567 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms