Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TAF4O00268 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TAF4O00268 LINC01521-201ENST00000504184 1943 ntBASIC19.66■□□□□ 0.74
TAF4O00268 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
TAF4O00268 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TAF4O00268 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TAF4O00268 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TAF4O00268 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TAF4O00268 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TAF4O00268 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.65■□□□□ 0.74
TAF4O00268 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.65■□□□□ 0.74
TAF4O00268 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.65■□□□□ 0.74
TAF4O00268 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.65■□□□□ 0.74
TAF4O00268 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.65■□□□□ 0.74
TAF4O00268 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.65■□□□□ 0.74
TAF4O00268 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.65■□□□□ 0.74
TAF4O00268 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 FAM21FP-204ENST00000608637 956 ntBASIC19.65■□□□□ 0.74
TAF4O00268 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.65■□□□□ 0.74
TAF4O00268 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.65■□□□□ 0.74
TAF4O00268 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.65■□□□□ 0.74
TAF4O00268 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.65■□□□□ 0.74
TAF4O00268 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TAF4O00268 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TAF4O00268 AC080038.3-201ENST00000623346 1952 ntBASIC19.64■□□□□ 0.74
TAF4O00268 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TAF4O00268 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TAF4O00268 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TAF4O00268 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TAF4O00268 TPM4P1-201ENST00000436100 807 ntBASIC19.64■□□□□ 0.73
TAF4O00268 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.64■□□□□ 0.73
TAF4O00268 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TAF4O00268 AL034346.1-201ENST00000568244 1277 ntBASIC19.64■□□□□ 0.73
TAF4O00268 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TAF4O00268 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TAF4O00268 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TAF4O00268 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.63■□□□□ 0.73
TAF4O00268 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.63■□□□□ 0.73
TAF4O00268 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.63■□□□□ 0.73
TAF4O00268 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.63■□□□□ 0.73
TAF4O00268 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.63■□□□□ 0.73
TAF4O00268 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.63■□□□□ 0.73
TAF4O00268 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.63■□□□□ 0.73
TAF4O00268 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TAF4O00268 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TAF4O00268 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 OR7E47P-201ENST00000546390 1422 ntBASIC19.62■□□□□ 0.73
TAF4O00268 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TAF4O00268 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.62■□□□□ 0.73
TAF4O00268 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.62■□□□□ 0.73
TAF4O00268 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.62■□□□□ 0.73
TAF4O00268 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.62■□□□□ 0.73
TAF4O00268 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.62■□□□□ 0.73
TAF4O00268 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TAF4O00268 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.62■□□□□ 0.73
TAF4O00268 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TAF4O00268 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms