Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.66■■□□□ 1.22
DDX39AO00148 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.66■■□□□ 1.22
DDX39AO00148 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
DDX39AO00148 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 DPP3P2-201ENST00000416030 1696 ntBASIC22.66■■□□□ 1.22
DDX39AO00148 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX39AO00148 CLDN5-201ENST00000403084 2357 ntBASIC22.66■■□□□ 1.22
DDX39AO00148 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 POM121L13P-201ENST00000422362 380 ntBASIC22.66■■□□□ 1.22
DDX39AO00148 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
DDX39AO00148 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.66■■□□□ 1.22
DDX39AO00148 AC069544.1-201ENST00000609399 999 ntBASIC22.66■■□□□ 1.22
DDX39AO00148 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX39AO00148 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX39AO00148 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX39AO00148 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
DDX39AO00148 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX39AO00148 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX39AO00148 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX39AO00148 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX39AO00148 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX39AO00148 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
DDX39AO00148 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX39AO00148 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
DDX39AO00148 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX39AO00148 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
DDX39AO00148 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX39AO00148 AC142381.4-202ENST00000563973 229 ntBASIC22.65■■□□□ 1.22
DDX39AO00148 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
DDX39AO00148 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX39AO00148 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX39AO00148 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
DDX39AO00148 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX39AO00148 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX39AO00148 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX39AO00148 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX39AO00148 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
DDX39AO00148 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.64■■□□□ 1.22
DDX39AO00148 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.64■■□□□ 1.22
DDX39AO00148 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
DDX39AO00148 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX39AO00148 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.64■■□□□ 1.21
DDX39AO00148 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX39AO00148 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
DDX39AO00148 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 AC066615.1-201ENST00000640911 628 ntBASIC22.64■■□□□ 1.21
DDX39AO00148 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
DDX39AO00148 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX39AO00148 AC092720.2-201ENST00000602388 1665 ntBASIC22.64■■□□□ 1.21
DDX39AO00148 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX39AO00148 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX39AO00148 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX39AO00148 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX39AO00148 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX39AO00148 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DDX39AO00148 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
DDX39AO00148 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 GCSHP5-201ENST00000443090 522 ntBASIC22.63■■□□□ 1.21
DDX39AO00148 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX39AO00148 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 AC120498.8-201ENST00000614275 531 ntBASIC22.63■■□□□ 1.21
DDX39AO00148 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX39AO00148 AC124283.5-201ENST00000624661 1809 ntBASIC22.63■■□□□ 1.21
DDX39AO00148 PTBP1P-201ENST00000554374 1601 ntBASIC22.63■■□□□ 1.21
DDX39AO00148 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.63■■□□□ 1.21
DDX39AO00148 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX39AO00148 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX39AO00148 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX39AO00148 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
DDX39AO00148 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX39AO00148 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX39AO00148 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX39AO00148 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX39AO00148 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
DDX39AO00148 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX39AO00148 C1QBPP2-201ENST00000528754 825 ntBASIC22.62■■□□□ 1.21
DDX39AO00148 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX39AO00148 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX39AO00148 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX39AO00148 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX39AO00148 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms