Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC188H7C350 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC188H7C350 KRT18P20-201ENST00000548986 1279 ntBASIC20.91■□□□□ 0.94
CCDC188H7C350 CCDC92B-201ENST00000575506 885 ntBASIC20.91■□□□□ 0.94
CCDC188H7C350 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC188H7C350 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC188H7C350 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC188H7C350 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC188H7C350 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC188H7C350 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC188H7C350 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC188H7C350 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC188H7C350 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.9■□□□□ 0.94
CCDC188H7C350 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC188H7C350 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC188H7C350 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC188H7C350 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC188H7C350 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC188H7C350 Z82202.1-201ENST00000623446 1880 ntBASIC20.9■□□□□ 0.94
CCDC188H7C350 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC188H7C350 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC188H7C350 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC188H7C350 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC188H7C350 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC188H7C350 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC188H7C350 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC188H7C350 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC188H7C350 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CCDC188H7C350 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCDC188H7C350 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC188H7C350 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC188H7C350 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC188H7C350 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC188H7C350 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC188H7C350 AL031432.3-201ENST00000607698 485 ntBASIC20.89■□□□□ 0.93
CCDC188H7C350 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC188H7C350 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC188H7C350 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC188H7C350 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC188H7C350 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CCDC188H7C350 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC188H7C350 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC188H7C350 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC188H7C350 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC188H7C350 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC188H7C350 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC188H7C350 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC188H7C350 AC104187.1-201ENST00000607510 612 ntBASIC20.88■□□□□ 0.93
CCDC188H7C350 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC188H7C350 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC188H7C350 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC188H7C350 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC188H7C350 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC188H7C350 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC188H7C350 RBM17P2-201ENST00000616397 1405 ntBASIC20.87■□□□□ 0.93
CCDC188H7C350 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC188H7C350 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC188H7C350 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CCDC188H7C350 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.87■□□□□ 0.93
CCDC188H7C350 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC188H7C350 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC188H7C350 AC105265.2-201ENST00000467189 838 ntBASIC20.87■□□□□ 0.93
CCDC188H7C350 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC188H7C350 AP001160.3-201ENST00000601484 763 ntBASIC20.87■□□□□ 0.93
CCDC188H7C350 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC188H7C350 MIR6084-201ENST00000622012 110 ntBASIC20.87■□□□□ 0.93
CCDC188H7C350 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC188H7C350 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC188H7C350 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC188H7C350 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC188H7C350 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC188H7C350 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC188H7C350 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms