Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 AC125437.2-201ENST00000625180 2167 ntBASIC14.29□□□□□ -0.12
LINC01549A6NIU2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 AL158211.5-201ENST00000623583 2518 ntBASIC14.28□□□□□ -0.12
LINC01549A6NIU2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01549A6NIU2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINC01549A6NIU2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
LINC01549A6NIU2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms