Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSC5DA1L4H1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSC5DA1L4H1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSC5DA1L4H1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.66■■□□□ 1.38
SSC5DA1L4H1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSC5DA1L4H1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.66■■□□□ 1.38
SSC5DA1L4H1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 KSR1P1-201ENST00000446298 240 ntBASIC23.65■■□□□ 1.38
SSC5DA1L4H1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 DUX4L26-201ENST00000489078 1255 ntBASIC23.65■■□□□ 1.38
SSC5DA1L4H1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 MESTP1-201ENST00000404287 994 ntBASIC23.65■■□□□ 1.38
SSC5DA1L4H1 AC010203.1-204ENST00000548782 407 ntBASIC23.65■■□□□ 1.38
SSC5DA1L4H1 CR392000.1-201ENST00000624770 1228 ntBASIC23.65■■□□□ 1.38
SSC5DA1L4H1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.65■■□□□ 1.38
SSC5DA1L4H1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SSC5DA1L4H1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SSC5DA1L4H1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 AC006011.2-201ENST00000621313 1158 ntBASIC23.64■■□□□ 1.37
SSC5DA1L4H1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SSC5DA1L4H1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 KRT18P22-201ENST00000402024 1347 ntBASIC23.63■■□□□ 1.37
SSC5DA1L4H1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.63■■□□□ 1.37
SSC5DA1L4H1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.62■■□□□ 1.37
SSC5DA1L4H1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SSC5DA1L4H1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.62■■□□□ 1.37
SSC5DA1L4H1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.62■■□□□ 1.37
SSC5DA1L4H1 NTF6B-201ENST00000591913 560 ntBASIC23.62■■□□□ 1.37
SSC5DA1L4H1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SSC5DA1L4H1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.62■■□□□ 1.37
SSC5DA1L4H1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SSC5DA1L4H1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.62■■□□□ 1.37
SSC5DA1L4H1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 AC104076.2-201ENST00000448912 469 ntBASIC23.61■■□□□ 1.37
SSC5DA1L4H1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 AL137013.1-201ENST00000432946 1228 ntBASIC23.61■■□□□ 1.37
SSC5DA1L4H1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.61■■□□□ 1.37
SSC5DA1L4H1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SSC5DA1L4H1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SSC5DA1L4H1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SSC5DA1L4H1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.6■■□□□ 1.37
SSC5DA1L4H1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SSC5DA1L4H1 C1QL1P1-201ENST00000568105 661 ntBASIC23.6■■□□□ 1.37
SSC5DA1L4H1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SSC5DA1L4H1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.6■■□□□ 1.37
SSC5DA1L4H1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 WWOX-216ENST00000569818 525 ntBASIC23.59■■□□□ 1.37
SSC5DA1L4H1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.59■■□□□ 1.37
SSC5DA1L4H1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SSC5DA1L4H1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms