Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 AC093503.3-201ENST00000624917 2352 ntBASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGKV2-28A0A075B6P5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 AC093484.2-201ENST00000580996 2166 ntBASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 AC233992.3-201ENST00000607491 485 ntBASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 AL136162.1-201ENST00000607711 1078 ntBASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 LETM1P2-201ENST00000597330 2178 ntBASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IGKV2-28A0A075B6P5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.27□□□□□ -0.28
IGKV2-28A0A075B6P5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 AC024257.2-201ENST00000549699 147 ntBASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 AC135279.3-201ENST00000610945 1311 ntBASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGKV2-28A0A075B6P5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.26□□□□□ -0.29
IGKV2-28A0A075B6P5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms