Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.92
HMG20BQ9P0W2 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 ISY1-202ENST00000393292 988 ntTSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 RPSAP44-201ENST00000406712 884 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AL590682.1-201ENST00000437248 344 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC108039.2-201ENST00000440214 359 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC104389.2-201ENST00000450768 887 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 BTF3P1-201ENST00000522014 495 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC016629.2-201ENST00000597341 199 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC143336.1-201ENST00000614164 836 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 pRNA.12-201ENST00000614353 90 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 pRNA.3-201ENST00000615048 90 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 PART1_3.1-201ENST00000619680 131 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 OR5AU1-204ENST00000641822 1197 ntBASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
HMG20BQ9P0W2 AC087501.5-201ENST00000607496 2374 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 TUBBP10-201ENST00000427668 1301 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AC025040.2-201ENST00000558657 1852 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 U3.31-201ENST00000408113 216 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AC023141.10-201ENST00000415634 200 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 SNX18P14-201ENST00000429308 574 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 RPL35P8-201ENST00000433284 337 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 RN7SL869P-201ENST00000497032 300 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 NDFIP1P1-201ENST00000543144 525 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 APP-209ENST00000440126 2846 ntTSL 2 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 TNFSF15-201ENST00000374044 2789 ntBASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
HMG20BQ9P0W2 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms