RNA–Protein interactions for RNA: ENST00000401061.8

MMACHC-201, Transcript of methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MMACHC, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMACHC-201ENST00000401061 MYT1Q01538 1121 aa14.21□□□□□ -0.13
MMACHC-201ENST00000401061 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
MMACHC-201ENST00000401061 TTBK1Q5TCY1 1321 aaPredicted RBP13.5□□□□□ -0.25
MMACHC-201ENST00000401061 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
MMACHC-201ENST00000401061 ERICH6Q7L0X2 663 aa13.2□□□□□ -0.3
MMACHC-201ENST00000401061 SLC24A1O60721 1099 aa13.06□□□□□ -0.32
MMACHC-201ENST00000401061 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
MMACHC-201ENST00000401061 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
MMACHC-201ENST00000401061 NISCHQ9Y2I1 1504 aa12.73□□□□□ -0.37
MMACHC-201ENST00000401061 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
MMACHC-201ENST00000401061 APLP2Q06481 763 aa12.62□□□□□ -0.39
MMACHC-201ENST00000401061 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
MMACHC-201ENST00000401061 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
MMACHC-201ENST00000401061 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
MMACHC-201ENST00000401061 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
MMACHC-201ENST00000401061 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
MMACHC-201ENST00000401061 NEFLP07196 543 aa12.39□□□□□ -0.43
MMACHC-201ENST00000401061 FAM9AQ8IZU1 332 aaPredicted RBP12.29□□□□□ -0.44
MMACHC-201ENST00000401061 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
MMACHC-201ENST00000401061 BCL11AQ9H165 835 aa12.25□□□□□ -0.45
MMACHC-201ENST00000401061 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
MMACHC-201ENST00000401061 RANGAP1P46060 587 aaPredicted RBP12.17□□□□□ -0.46
MMACHC-201ENST00000401061 YTHDC1Q96MU7 727 aaKnown RBP12.17□□□□□ -0.46
MMACHC-201ENST00000401061 HRCP23327 699 aa12.04□□□□□ -0.48
MMACHC-201ENST00000401061 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
MMACHC-201ENST00000401061 RTL5Q5HYW3 569 aaPredicted RBP11.93□□□□□ -0.5
MMACHC-201ENST00000401061 ATP1B4Q9UN42 357 aaPredicted RBP11.9□□□□□ -0.5
MMACHC-201ENST00000401061 TRIM26Q12899 539 aaPredicted RBP11.89□□□□□ -0.51
MMACHC-201ENST00000401061 UBTFP17480 764 aaKnown RBP11.88□□□□□ -0.51
MMACHC-201ENST00000401061 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
MMACHC-201ENST00000401061 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
MMACHC-201ENST00000401061 CLSPNQ9HAW4 1339 aa11.67□□□□□ -0.54
MMACHC-201ENST00000401061 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
MMACHC-201ENST00000401061 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
MMACHC-201ENST00000401061 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
MMACHC-201ENST00000401061 ANP32EQ9BTT0 268 aa11.64□□□□□ -0.55
MMACHC-201ENST00000401061 GLIPR1L2Q4G1C9 344 aa11.64□□□□□ -0.55
MMACHC-201ENST00000401061 DIEXFQ68CQ4 756 aaKnown RBP11.62□□□□□ -0.55
MMACHC-201ENST00000401061 GTF3C3Q9Y5Q9 886 aa11.58□□□□□ -0.56
MMACHC-201ENST00000401061 ITGAEP38570 1179 aa11.55□□□□□ -0.56
MMACHC-201ENST00000401061 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
MMACHC-201ENST00000401061 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
MMACHC-201ENST00000401061 HNRNPUL2Q1KMD3 747 aaKnown RBP11.52□□□□□ -0.57
MMACHC-201ENST00000401061 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
MMACHC-201ENST00000401061 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
MMACHC-201ENST00000401061 NCBP3Q53F19 620 aaKnown RBP11.45□□□□□ -0.58
MMACHC-201ENST00000401061 BCANQ96GW7 911 aa11.45□□□□□ -0.58
MMACHC-201ENST00000401061 PKNOX2Q96KN3 472 aa11.43□□□□□ -0.58
MMACHC-201ENST00000401061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
MMACHC-201ENST00000401061 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
MMACHC-201ENST00000401061 ANP32AP39687 249 aaKnown RBP11.4□□□□□ -0.58
MMACHC-201ENST00000401061 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
MMACHC-201ENST00000401061 ANP32CO43423 234 aa11.38□□□□□ -0.59
MMACHC-201ENST00000401061 LOC105371045A0A1W2PR82 267 aa11.38□□□□□ -0.59
MMACHC-201ENST00000401061 UBE2Q2Q8WVN8 375 aa11.37□□□□□ -0.59
MMACHC-201ENST00000401061 CHIC1Q5VXU3 224 aa11.35□□□□□ -0.59
MMACHC-201ENST00000401061 PLEKHG5O94827 1062 aa11.35□□□□□ -0.59
MMACHC-201ENST00000401061 ARXQ96QS3 562 aa11.35□□□□□ -0.59
MMACHC-201ENST00000401061 ABCC9O60706 1549 aa11.34□□□□□ -0.59
MMACHC-201ENST00000401061 ANP32BQ92688 251 aaKnown RBP11.34□□□□□ -0.59
MMACHC-201ENST00000401061 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
MMACHC-201ENST00000401061 CANXP27824 592 aaKnown RBP11.27□□□□□ -0.61
MMACHC-201ENST00000401061 HOMEZQ8IX15 550 aa11.24□□□□□ -0.61
MMACHC-201ENST00000401061 FAM50AQ14320 339 aaKnown RBP11.23□□□□□ -0.61
MMACHC-201ENST00000401061 ERICH6BQ5W0A0 696 aa11.23□□□□□ -0.61
MMACHC-201ENST00000401061 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
MMACHC-201ENST00000401061 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
MMACHC-201ENST00000401061 PDE4CQ08493 712 aa11.21□□□□□ -0.61
MMACHC-201ENST00000401061 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
MMACHC-201ENST00000401061 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
MMACHC-201ENST00000401061 NEFMP07197 916 aa11.16□□□□□ -0.62
MMACHC-201ENST00000401061 UPF2Q9HAU5 1272 aaKnown RBP11.16□□□□□ -0.62
MMACHC-201ENST00000401061 HSP90AA1P07900 732 aaKnown RBP11.15□□□□□ -0.62
MMACHC-201ENST00000401061 PDIA4P13667 645 aaKnown RBP11.15□□□□□ -0.62
MMACHC-201ENST00000401061 ZNF326Q5BKZ1 582 aaKnown RBP11.14□□□□□ -0.63
MMACHC-201ENST00000401061 RTN4Q9NQC3 1192 aaKnown RBP11.14□□□□□ -0.63
MMACHC-201ENST00000401061 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
MMACHC-201ENST00000401061 FKBP8Q14318 412 aa11.12□□□□□ -0.63
MMACHC-201ENST00000401061 CCDC136Q96JN2 1154 aa11.08□□□□□ -0.64
MMACHC-201ENST00000401061 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
MMACHC-201ENST00000401061 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
MMACHC-201ENST00000401061 A0A0U1RQG5 324 aaPredicted RBP11.06□□□□□ -0.64
MMACHC-201ENST00000401061 PLPPR3Q6T4P5 718 aa11.05□□□□□ -0.64
MMACHC-201ENST00000401061 NBR1Q14596 966 aa11.04□□□□□ -0.64
MMACHC-201ENST00000401061 TNNT2P45379 298 aaPredicted RBP11.01□□□□□ -0.65
MMACHC-201ENST00000401061 C14orf37Q86TY3 774 aa11□□□□□ -0.65
MMACHC-201ENST00000401061 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
MMACHC-201ENST00000401061 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
MMACHC-201ENST00000401061 HNRNPUQ00839 825 aaKnown RBP eCLIP10.99□□□□□ -0.65
MMACHC-201ENST00000401061 TIMELESSQ9UNS1 1208 aa10.99□□□□□ -0.65
MMACHC-201ENST00000401061 HAP1P54257 671 aaPredicted RBP10.99□□□□□ -0.65
MMACHC-201ENST00000401061 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
MMACHC-201ENST00000401061 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
MMACHC-201ENST00000401061 TRIM44Q96DX7 344 aaPredicted RBP10.95□□□□□ -0.66
MMACHC-201ENST00000401061 DEKP35659 375 aaKnown RBP10.94□□□□□ -0.66
MMACHC-201ENST00000401061 CDK11BP21127 795 aaKnown RBP10.94□□□□□ -0.66
MMACHC-201ENST00000401061 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
MMACHC-201ENST00000401061 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
MMACHC-201ENST00000401061 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
MMACHC-201ENST00000401061 TONSLQ96HA7 1378 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms