Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 C16orf52-201ENST00000331057 1359 ntTSL 1 (best)23.81■■□□□ 1.46e-7■■□□□ 12.3
PRPF8Q6P2Q9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.79■□□□□ 0.926e-7■■□□□ 12.3
PRPF8Q6P2Q9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.566e-7■■□□□ 12.3
PRPF8Q6P2Q9 C16orf52-204ENST00000562695 695 ntTSL 2 BASIC9.83□□□□□ -0.846e-7■■□□□ 12.3
PRPF8Q6P2Q9 C16orf52-203ENST00000562186 605 ntTSL 36.79□□□□□ -1.326e-7■■□□□ 12.3
PRPF8Q6P2Q9 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.2□□□□□ -1.586e-7■■□□□ 12.3
PRPF8Q6P2Q9 RAB11FIP4-209ENST00000583755 567 ntTSL 417.22■□□□□ 0.351e-6■■□□□ 12.3
PRPF8Q6P2Q9 BORCS8-MEF2B-204ENST00000602276 708 ntTSL 513.16□□□□□ -0.31e-8■■□□□ 12.3
PRPF8Q6P2Q9 BORCS8-207ENST00000588208 457 ntTSL 38.54□□□□□ -1.041e-8■■□□□ 12.3
PRPF8Q6P2Q9 MSI2-210ENST00000579505 577 ntTSL 314.92□□□□□ -0.021e-6■■□□□ 12.3
PRPF8Q6P2Q9 ATP13A1-213ENST00000497156 715 ntTSL 213.65□□□□□ -0.222e-7■■□□□ 12.3
PRPF8Q6P2Q9 ATP13A1-206ENST00000471063 373 ntTSL 210.08□□□□□ -0.82e-7■■□□□ 12.3
PRPF8Q6P2Q9 WNK2-215ENST00000478583 537 ntTSL 49.43□□□□□ -0.92e-6■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-231ENST00000560614 547 ntTSL 412.53□□□□□ -0.41e-9■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-213ENST00000558638 581 ntTSL 412.12□□□□□ -0.471e-9■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-236ENST00000561041 570 ntTSL 39.35□□□□□ -0.911e-9■■□□□ 12.3
PRPF8Q6P2Q9 DCAF11-223ENST00000559451 659 ntTSL 59.32□□□□□ -0.921e-9■■□□□ 12.3
PRPF8Q6P2Q9 TECR-213ENST00000598408 508 ntTSL 317■□□□□ 0.311e-9■■□□□ 12.2
PRPF8Q6P2Q9 TECR-203ENST00000593775 720 ntTSL 211.67□□□□□ -0.541e-9■■□□□ 12.2
PRPF8Q6P2Q9 TECR-206ENST00000594958 601 ntTSL 39.88□□□□□ -0.831e-9■■□□□ 12.2
PRPF8Q6P2Q9 TECR-217ENST00000599101 584 ntTSL 28.46□□□□□ -1.061e-9■■□□□ 12.2
PRPF8Q6P2Q9 MICALL2-206ENST00000470807 668 ntTSL 314.35□□□□□ -0.112e-9■■□□□ 12.2
PRPF8Q6P2Q9 KIF1B-213ENST00000635499 2098 ntTSL 59.02□□□□□ -0.977e-7■■□□□ 12.2
PRPF8Q6P2Q9 KIF1B-208ENST00000483340 839 ntTSL 24.75□□□□□ -1.657e-7■■□□□ 12.2
PRPF8Q6P2Q9 KIF1B-206ENST00000465635 759 ntTSL 34.09□□□□□ -1.767e-7■■□□□ 12.2
PRPF8Q6P2Q9 GCDH-205ENST00000587072 453 ntTSL 513.79□□□□□ -0.21e-6■■□□□ 12.2
PRPF8Q6P2Q9 GCDH-210ENST00000590445 496 ntTSL 413.63□□□□□ -0.231e-6■■□□□ 12.2
PRPF8Q6P2Q9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.429e-8■■□□□ 12.2
PRPF8Q6P2Q9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.44□□□□□ -0.429e-8■■□□□ 12.2
PRPF8Q6P2Q9 CISH-203ENST00000491847 5042 ntTSL 1 (best)10.51□□□□□ -0.739e-8■■□□□ 12.2
PRPF8Q6P2Q9 SDCCAG8-203ENST00000463012 430 ntTSL 21.98□□□□□ -2.091e-6■■□□□ 12.2
PRPF8Q6P2Q9 IMP4-214ENST00000475074 512 ntTSL 29.02□□□□□ -0.972e-8■■□□□ 12.2
PRPF8Q6P2Q9 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC9.43□□□□□ -0.92e-6■■□□□ 12.2
PRPF8Q6P2Q9 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.172e-6■■□□□ 12.2
PRPF8Q6P2Q9 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.29□□□□□ -1.242e-6■■□□□ 12.2
PRPF8Q6P2Q9 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.65□□□□□ -1.352e-6■■□□□ 12.2
PRPF8Q6P2Q9 CYB5B-206ENST00000568237 577 ntTSL 53.83□□□□□ -1.82e-6■■□□□ 12.2
PRPF8Q6P2Q9 CYB5B-207ENST00000568342 648 ntTSL 52.79□□□□□ -1.962e-6■■□□□ 12.2
PRPF8Q6P2Q9 PFKL-209ENST00000495274 951 ntTSL 213.74□□□□□ -0.216e-7■■□□□ 12.2
PRPF8Q6P2Q9 PIGQ-217ENST00000635205 936 ntTSL 513.96□□□□□ -0.171e-6■■□□□ 12.2
PRPF8Q6P2Q9 PIGQ-211ENST00000480424 2202 ntTSL 213.11□□□□□ -0.311e-6■■□□□ 12.2
PRPF8Q6P2Q9 INTS6-217ENST00000491723 713 ntTSL 516.77■□□□□ 0.284e-18■■□□□ 12.2
PRPF8Q6P2Q9 INTS6-209ENST00000483288 597 ntTSL 47.21□□□□□ -1.264e-18■■□□□ 12.2
PRPF8Q6P2Q9 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.35□□□□□ -1.394e-18■■□□□ 12.2
PRPF8Q6P2Q9 INTS6-212ENST00000485178 474 ntTSL 53.75□□□□□ -1.814e-18■■□□□ 12.2
PRPF8Q6P2Q9 PPP2R3B-207ENST00000477636 519 ntTSL 514.25□□□□□ -0.135e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC38A5-205ENST00000441948 871 ntTSL 511.49□□□□□ -0.575e-7■■□□□ 12.2
PRPF8Q6P2Q9 SLC38A5-204ENST00000440085 910 ntTSL 311.18□□□□□ -0.625e-7■■□□□ 12.2
PRPF8Q6P2Q9 DENND4B-208ENST00000480340 2530 ntTSL 211.3□□□□□ -0.64e-8■■□□□ 12.2
PRPF8Q6P2Q9 CNPY2-207ENST00000551276 556 ntTSL 516.14■□□□□ 0.172e-13■■□□□ 12.2
PRPF8Q6P2Q9 CNPY2-205ENST00000547570 624 ntTSL 39.62□□□□□ -0.872e-13■■□□□ 12.2
PRPF8Q6P2Q9 SLC26A11-210ENST00000572226 623 ntTSL 312.33□□□□□ -0.442e-6■■□□□ 12.2
PRPF8Q6P2Q9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.05■□□□□ 0.966e-8■■□□□ 12.2
PRPF8Q6P2Q9 VASP-208ENST00000589627 696 ntTSL 320.56■□□□□ 0.886e-8■■□□□ 12.2
PRPF8Q6P2Q9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.91■□□□□ 0.786e-8■■□□□ 12.2
PRPF8Q6P2Q9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.36■□□□□ 0.696e-8■■□□□ 12.2
PRPF8Q6P2Q9 TMCO6-202ENST00000394669 375 ntTSL 218.37■□□□□ 0.534e-8■■□□□ 12.2
PRPF8Q6P2Q9 NEK3-202ENST00000550841 569 ntTSL 417.78■□□□□ 0.441e-19■■□□□ 12.2
PRPF8Q6P2Q9 TECPR1-208ENST00000471397 774 ntTSL 317.23■□□□□ 0.356e-8■■□□□ 12.2
PRPF8Q6P2Q9 MYL5-203ENST00000503300 1780 ntTSL 217.12■□□□□ 0.336e-8■■□□□ 12.2
PRPF8Q6P2Q9 TMEM132A-205ENST00000536409 454 ntTSL 317.1■□□□□ 0.336e-8■■□□□ 12.2
PRPF8Q6P2Q9 NFKB2-205ENST00000467116 1634 ntTSL 216.87■□□□□ 0.296e-8■■□□□ 12.2
PRPF8Q6P2Q9 COLCA2-203ENST00000528846 823 ntTSL 316.75■□□□□ 0.276e-8■■□□□ 12.2
PRPF8Q6P2Q9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.196e-8■■□□□ 12.2
PRPF8Q6P2Q9 ZNF689-205ENST00000565710 602 ntTSL 216.18■□□□□ 0.186e-8■■□□□ 12.2
PRPF8Q6P2Q9 MYC-208ENST00000641036 567 ntBASIC16.14■□□□□ 0.182e-13■■□□□ 12.2
PRPF8Q6P2Q9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.97■□□□□ 0.156e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHF20-207ENST00000461122 919 ntTSL 315.91■□□□□ 0.146e-8■■□□□ 12.2
PRPF8Q6P2Q9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.68■□□□□ 0.16e-8■■□□□ 12.2
PRPF8Q6P2Q9 GAK-203ENST00000502799 2281 ntTSL 215.66■□□□□ 0.16e-8■■□□□ 12.2
PRPF8Q6P2Q9 NPHP4-210ENST00000506941 570 ntTSL 415.4■□□□□ 0.066e-8■■□□□ 12.2
PRPF8Q6P2Q9 PSMD4-203ENST00000427779 649 ntTSL 315□□□□□ -0.014e-6■■□□□ 12.2
PRPF8Q6P2Q9 DGAT2-206ENST00000604733 885 ntTSL 1 (best)15□□□□□ -0.016e-8■■□□□ 12.2
PRPF8Q6P2Q9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.53□□□□□ -0.086e-8■■□□□ 12.2
PRPF8Q6P2Q9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.176e-8■■□□□ 12.2
PRPF8Q6P2Q9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.186e-8■■□□□ 12.2
PRPF8Q6P2Q9 COLCA2-207ENST00000639470 1207 ntTSL 1 (best)13.92□□□□□ -0.186e-8■■□□□ 12.2
PRPF8Q6P2Q9 IGHMBP2-203ENST00000537458 813 ntTSL 313.75□□□□□ -0.216e-8■■□□□ 12.2
PRPF8Q6P2Q9 VPS4A-202ENST00000562754 633 ntTSL 213.69□□□□□ -0.222e-6■■□□□ 12.2
PRPF8Q6P2Q9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.246e-8■■□□□ 12.2
PRPF8Q6P2Q9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.5□□□□□ -0.256e-8■■□□□ 12.2
PRPF8Q6P2Q9 IFT43-211ENST00000555677 487 ntTSL 412.81□□□□□ -0.366e-8■■□□□ 12.2
PRPF8Q6P2Q9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.7□□□□□ -0.386e-8■■□□□ 12.2
PRPF8Q6P2Q9 MYL5-209ENST00000513662 731 ntTSL 512.62□□□□□ -0.396e-8■■□□□ 12.2
PRPF8Q6P2Q9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.38□□□□□ -0.436e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHF20-216ENST00000617560 618 ntTSL 212.21□□□□□ -0.466e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHF20-206ENST00000452270 832 ntTSL 512.06□□□□□ -0.486e-8■■□□□ 12.2
PRPF8Q6P2Q9 TECPR1-209ENST00000472845 551 ntTSL 511.93□□□□□ -0.56e-8■■□□□ 12.2
PRPF8Q6P2Q9 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.61□□□□□ -0.556e-8■■□□□ 12.2
PRPF8Q6P2Q9 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.616e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHF20-201ENST00000339089 1997 ntTSL 210.73□□□□□ -0.696e-8■■□□□ 12.2
PRPF8Q6P2Q9 C2CD2-208ENST00000490479 761 ntTSL 310.69□□□□□ -0.76e-8■■□□□ 12.2
PRPF8Q6P2Q9 STRIP1-209ENST00000540970 536 ntTSL 310.67□□□□□ -0.76e-8■■□□□ 12.2
PRPF8Q6P2Q9 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.716e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHF20-211ENST00000481202 1635 ntTSL 1 (best)10.28□□□□□ -0.766e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-215ENST00000569639 568 ntTSL 4 BASIC10.27□□□□□ -0.776e-8■■□□□ 12.2
PRPF8Q6P2Q9 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC10.21□□□□□ -0.776e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHF20-202ENST00000374000 1814 ntTSL 1 (best)10.18□□□□□ -0.786e-8■■□□□ 12.2
PRPF8Q6P2Q9 ZNF689-206ENST00000566673 1412 ntTSL 210.17□□□□□ -0.786e-8■■□□□ 12.2
PRPF8Q6P2Q9 AC025283.2-202ENST00000575785 560 ntTSL 410.16□□□□□ -0.786e-8■■□□□ 12.2
Retrieved 100 of 73,762 protein–RNA pairs in 1103.5 ms