Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AC090643.1-201ENST00000623600 3100 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 HMGB3P1-201ENST00000393368 573 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CYP2C56P-201ENST00000440076 291 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 OR7E96P-201ENST00000530816 976 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 RPL35AP25-201ENST00000584631 330 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AC129492.5-201ENST00000603489 315 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AC243830.3-201ENST00000616810 376 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AL669830.1-201ENST00000621457 656 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 SAMMSON-222ENST00000641901 2727 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 SLC9B1P3-201ENST00000452667 1334 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 MIR575-201ENST00000385013 94 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 MSRB1P1-201ENST00000396851 354 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 RN7SKP89-201ENST00000410774 242 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 CHIAP1-201ENST00000456220 995 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 OR7E62P-201ENST00000456741 477 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AP002383.5-201ENST00000542623 1161 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 RN7SL25P-201ENST00000583862 260 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AC103724.4-201ENST00000605981 292 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AL590560.2-201ENST00000608430 732 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 RN7SL680P-201ENST00000620379 299 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AC119674.1-209ENST00000642031 997 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 SF3A3P1-201ENST00000446317 1477 ntBASIC8.12□□□□□ -1.11
LMO3Q8TAP4 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LMO3Q8TAP4 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 ZNF192P2-201ENST00000402215 1383 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms