Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SNX18P9-201ENST00000440580 835 ntBASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 RPL6P24-201ENST00000445338 864 ntBASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 TCEAL4P1-201ENST00000453620 588 ntBASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 GAS2-210ENST00000630668 674 ntTSL 5 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
HMG20BQ9P0W2 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 NF1P7-201ENST00000612076 1530 ntBASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 MIR301B-201ENST00000390813 78 ntBASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 OLA1P1-201ENST00000396387 1189 ntBASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 RN7SL635P-201ENST00000492123 296 ntBASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 OR7E83P-201ENST00000511021 970 ntBASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 PHF2P2-202ENST00000444553 2865 ntBASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HMG20BQ9P0W2 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AC100810.3-201ENST00000633189 2240 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 MAPK10-290ENST00000641237 2826 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 SNORA30B-201ENST00000365319 129 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 RN7SL228P-201ENST00000470060 303 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 RN7SL647P-201ENST00000485429 300 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AC079768.1-201ENST00000503181 711 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 REG4-204ENST00000530654 612 ntTSL 5 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AC133569.1-201ENST00000564327 373 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AC004852.1-201ENST00000605206 154 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 MIR6731-201ENST00000614863 72 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AL606760.4-201ENST00000617613 718 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AL353898.2-201ENST00000623000 255 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AC002094.5-201ENST00000623773 629 ntBASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HMG20BQ9P0W2 AC096745.2-201ENST00000627783 1914 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms