Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
NPIPA3F8WFD2 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPIPA3F8WFD2 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 TUBBP10-201ENST00000427668 1301 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AL365475.1-201ENST00000565135 1949 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 SNORA10-201ENST00000384084 133 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 SNORA7B-201ENST00000384360 139 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC226101.1-201ENST00000401483 387 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 ST13P13-201ENST00000417082 1092 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AL353754.1-201ENST00000440219 340 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AL136454.1-201ENST00000443181 466 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC097460.2-201ENST00000511857 741 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 IGHVIV-44-1-201ENST00000519334 338 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 OR4N1P-201ENST00000554847 949 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC092133.1-201ENST00000565828 719 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 GLUD1P2-201ENST00000583339 201 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 GLUD1P8-201ENST00000585063 203 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AL121936.1-201ENST00000641660 2884 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 AC022306.1-201ENST00000560489 1562 ntBASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPIPA3F8WFD2 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 AC073324.1-201ENST00000425993 1435 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 THAP12P1-201ENST00000398672 2203 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 MITD1-201ENST00000289359 939 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 RN7SKP50-201ENST00000364694 315 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 RN7SKP208-201ENST00000365474 361 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 RN7SKP1-201ENST00000365525 307 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 OR7E91P-201ENST00000400027 866 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 AL080285.1-201ENST00000404225 984 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 MED15P9-201ENST00000424716 533 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 AC114755.1-201ENST00000453101 868 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 RN7SL282P-201ENST00000479676 297 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 AC090835.1-201ENST00000515189 1024 ntBASIC7.11□□□□□ -1.27
NPIPA3F8WFD2 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms