Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC9.77□□□□□ -0.85
COL15A1P39059 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
COL15A1P39059 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 U3.48-201ENST00000363172 216 ntBASIC9.76□□□□□ -0.85
COL15A1P39059 RNA5SP396-201ENST00000364834 120 ntBASIC9.76□□□□□ -0.85
COL15A1P39059 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
COL15A1P39059 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC9.76□□□□□ -0.85
COL15A1P39059 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC9.76□□□□□ -0.85
COL15A1P39059 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC9.76□□□□□ -0.85
COL15A1P39059 AL592114.2-201ENST00000440142 532 ntBASIC9.76□□□□□ -0.85
COL15A1P39059 IGHVIV-44-1-201ENST00000519334 338 ntBASIC9.76□□□□□ -0.85
COL15A1P39059 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC9.76□□□□□ -0.85
COL15A1P39059 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
COL15A1P39059 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 AL136139.1-201ENST00000605568 222 ntBASIC9.76□□□□□ -0.85
COL15A1P39059 AC119674.1-221ENST00000641594 1213 ntBASIC9.76□□□□□ -0.85
COL15A1P39059 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC9.76□□□□□ -0.85
COL15A1P39059 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 HSP90AB2P-201ENST00000507090 2176 ntBASIC9.76□□□□□ -0.85
COL15A1P39059 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
COL15A1P39059 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
COL15A1P39059 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC9.76□□□□□ -0.85
COL15A1P39059 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
COL15A1P39059 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
COL15A1P39059 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 RN7SKP225-201ENST00000410405 352 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 SNX18P3-201ENST00000424993 835 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 OR52S1P-201ENST00000427016 937 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC9.75□□□□□ -0.85
COL15A1P39059 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC9.75□□□□□ -0.85
COL15A1P39059 RN7SL55P-201ENST00000464534 297 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AF305872.1-201ENST00000485217 471 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AC108688.1-201ENST00000485817 713 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC9.75□□□□□ -0.85
COL15A1P39059 NACAP1-202ENST00000519039 641 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC9.75□□□□□ -0.85
COL15A1P39059 AP000435.1-201ENST00000528539 496 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 NDFIP1P1-201ENST00000543144 525 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 AC005070.2-201ENST00000604391 260 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AL136985.2-201ENST00000607372 535 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AL606760.4-201ENST00000617613 718 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 ERG-206ENST00000398911 4914 ntTSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
COL15A1P39059 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
COL15A1P39059 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
COL15A1P39059 AC090114.1-201ENST00000393266 448 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 SRI-202ENST00000394641 653 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
COL15A1P39059 MICG-208ENST00000416822 132 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 AL359633.1-201ENST00000421403 310 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 NQO1-204ENST00000439109 924 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 TREML3P-201ENST00000457327 501 ntBASIC9.75□□□□□ -0.85
COL15A1P39059 ANK3-213ENST00000486349 493 ntTSL 2 BASIC9.75□□□□□ -0.85
COL15A1P39059 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms