Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC091304.5-201ENST00000568969 158 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC010186.4-201ENST00000573622 615 ntTSL 3 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 MTND1P15-201ENST00000579262 949 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 RN7SL42P-201ENST00000579786 294 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 RPL17-212ENST00000581373 584 ntTSL 2 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 UBBP4-201ENST00000583708 689 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 RN7SL246P-201ENST00000584467 296 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC003002.2-201ENST00000597658 456 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 HMGB1P51-201ENST00000605166 638 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 AC132807.2-202ENST00000616960 339 ntTSL 5 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 SPRY4-IT1-201ENST00000630558 703 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 PPP1R12B-218ENST00000634903 878 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 RASGEF1B-213ENST00000613784 3485 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 CD28-202ENST00000374481 4526 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 GIMAP5-201ENST00000358647 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 SLC6A15-211ENST00000552192 2221 ntTSL 2 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 EXD2-202ENST00000409014 3404 ntTSL 2 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 HCG18-242ENST00000602319 3342 ntBASIC9.94□□□□□ -0.82
LRCH3Q96II8 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 ASTN1-202ENST00000361833 7116 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LRCH3Q96II8 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC9.94□□□□□ -0.82
LRCH3Q96II8 GPR156-203ENST00000464295 4442 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 LINC02011-201ENST00000566553 3830 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 PPP2R5D-203ENST00000461010 1558 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 SH2D1A-202ENST00000371139 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 MAPK10-295ENST00000641274 2259 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 MAPK10-310ENST00000641384 2213 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 SNW1-201ENST00000261531 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 RN7SKP76-201ENST00000364419 323 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 MIR1231-201ENST00000408101 92 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC017104.2-201ENST00000417000 321 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 SEM1-204ENST00000417009 350 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AL161447.1-201ENST00000427811 230 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 ARL6IP1P2-201ENST00000431356 563 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AL136455.1-201ENST00000441083 1240 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AL669831.5-219ENST00000443772 417 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC068135.1-201ENST00000446164 246 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 EEF1E1P1-201ENST00000446998 430 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 RNF148-202ENST00000447240 839 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 OTX2P1-201ENST00000450956 354 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 RPSAP54-201ENST00000454001 886 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 CFTRP1-201ENST00000456646 183 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 CBX1P5-201ENST00000475330 559 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 BNIP3P41-201ENST00000503774 571 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 RPL37P25-201ENST00000507308 276 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AP001830.2-201ENST00000529278 494 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC144548.1-201ENST00000549577 324 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 RN7SL657P-201ENST00000582431 293 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 AL117336.2-201ENST00000602435 335 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC055822.1-201ENST00000606067 445 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 DLEU2_1.1-201ENST00000612089 120 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 DLEU2_1.2-201ENST00000614667 120 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 AC099654.12-201ENST00000639868 649 ntBASIC9.93□□□□□ -0.82
LRCH3Q96II8 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 LIPC-201ENST00000299022 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 CHODL-202ENST00000338326 1974 ntTSL 5 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms